Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav18A0A075B656 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Gm36967-201ENSMUST00000193814 266 ntBASIC13.21□□□□□ -0.29
Trav18A0A075B656 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.21□□□□□ -0.29
Trav18A0A075B656 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav18A0A075B656 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav18A0A075B656 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav18A0A075B656 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Trav18A0A075B656 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav18A0A075B656 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav18A0A075B656 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.2□□□□□ -0.3
Trav18A0A075B656 Gm29707-201ENSMUST00000196325 491 ntBASIC13.2□□□□□ -0.3
Trav18A0A075B656 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.2□□□□□ -0.3
Trav18A0A075B656 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.2□□□□□ -0.3
Trav18A0A075B656 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav18A0A075B656 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav18A0A075B656 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav18A0A075B656 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.19□□□□□ -0.3
Trav18A0A075B656 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav18A0A075B656 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms