Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav3-4A0A075B654 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Mir7075-201ENSMUST00000184187 82 ntBASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.87□□□□□ -0.67
Trav3-4A0A075B654 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-4A0A075B654 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms