Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm29707-201ENSMUST00000196325 491 ntBASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.56□□□□□ -0.4
Trav4-4-dv10A0A075B651 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-4-dv10A0A075B651 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-4-dv10A0A075B651 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms