Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Gm10493-201ENSMUST00000097270 612 ntBASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 App-207ENSMUST00000227737 2827 ntBASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav8-1A0A075B641 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav8-1A0A075B641 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav8-1A0A075B641 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Gm38285-201ENSMUST00000192928 922 ntBASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Trav8-1A0A075B641 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms