Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16nA0A075B634 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Il3ra-202ENSMUST00000223589 738 ntBASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav16nA0A075B634 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16nA0A075B634 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Gm7638-201ENSMUST00000121348 967 ntBASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Gm8495-201ENSMUST00000188740 694 ntBASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16nA0A075B634 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms