Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-4A0A075B631 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-4A0A075B631 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9n-4A0A075B631 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Gm7370-201ENSMUST00000219471 767 ntBASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-4A0A075B631 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Gm13474-201ENSMUST00000122466 815 ntBASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-4A0A075B631 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Gm16061-201ENSMUST00000122167 857 ntBASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Gm7213-201ENSMUST00000215977 950 ntBASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms