Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Odf3b-204ENSMUST00000227834 930 ntBASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15d-1-dv6d-1A0A075B624 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Phf7-203ENSMUST00000226565 1971 ntBASIC13.71□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms