Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Mir6349-201ENSMUST00000184059 97 ntBASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav4n-4A0A075B615 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Flg-201ENSMUST00000050758 1488 ntBASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav4n-4A0A075B615 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Gm6576-201ENSMUST00000169678 883 ntBASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav4n-4A0A075B615 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav4n-4A0A075B615 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms