Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Gm9731-201ENSMUST00000209480 747 ntBASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-6A0A075B603 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav6-6A0A075B603 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trav6-6A0A075B603 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav6-6A0A075B603 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-6A0A075B603 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-6A0A075B603 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-6A0A075B603 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-6A0A075B603 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-6A0A075B603 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-6A0A075B603 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms