Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9-1A0A075B601 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9-1A0A075B601 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9-1A0A075B601 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9-1A0A075B601 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.58□□□□□ -0.39
Trav9-1A0A075B601 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9-1A0A075B601 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trav9-1A0A075B601 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9-1A0A075B601 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9-1A0A075B601 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Mir5130-201ENSMUST00000175160 84 ntBASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Gm7889-201ENSMUST00000185591 958 ntBASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9-1A0A075B601 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms