Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav1A0A075B5Z4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav1A0A075B5Z4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.96□□□□□ -0.02
Trav1A0A075B5Z4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav1A0A075B5Z4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav1A0A075B5Z4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Gm9987-201ENSMUST00000069768 567 ntBASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav1A0A075B5Z4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav1A0A075B5Z4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Mir6404-201ENSMUST00000183699 94 ntBASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav1A0A075B5Z4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms