Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-864P-201ENST00000516256 108 ntBASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 RNU6-1146P-201ENST00000516282 102 ntBASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 RNU6-1314P-201ENST00000517139 104 ntBASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 MIR4285-201ENST00000581001 85 ntBASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 MIR3942-201ENST00000585264 109 ntBASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 7SK.7-201ENST00000603504 247 ntBASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 AL078596.1-201ENST00000624856 447 ntBASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 AC100810.6-201ENST00000638068 285 ntBASIC1.26□□□□□ -2.21
CLCF1Q9UBD9 Y_RNA.4-201ENST00000362333 112 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 RNU6-137P-201ENST00000363680 108 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 MIR153-2-201ENST00000385225 87 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 RNU6-360P-201ENST00000390944 104 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AL117342.1-201ENST00000404861 406 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 C8orf59P1-201ENST00000429930 303 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 FTH1P12-201ENST00000432137 551 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AC245047.4-201ENST00000433189 144 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 Z82188.1-201ENST00000436709 154 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 snoU13.30-201ENST00000458951 104 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 RNU7-57P-201ENST00000459540 60 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 RNA5SP481-201ENST00000516814 122 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AC084364.2-201ENST00000546924 395 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AC016925.2-201ENST00000605108 242 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AC126177.8-201ENST00000618339 1015 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 MIR338-201ENST00000636369 67 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 AC068205.3-201ENST00000636385 468 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 MIR3662-201ENST00000637030 95 ntBASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
CLCF1Q9UBD9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 AL391987.6-201ENST00000305671 199 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 SNORA72.2-201ENST00000365028 127 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 Y_RNA.319-201ENST00000365138 92 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 RNU6-541P-201ENST00000384709 110 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 MIR487A-201ENST00000385009 80 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 SNORD115-47-201ENST00000391226 86 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 MIR1267-201ENST00000408723 78 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 HSPE1P9-201ENST00000440046 311 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 SNRPGP13-201ENST00000442212 177 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 snoU13.9-201ENST00000458927 103 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 Y_RNA.655-201ENST00000515919 96 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 RNU6-58P-201ENST00000517143 103 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 MIR5696-201ENST00000578474 85 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 MIR4273-201ENST00000582824 84 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 SNORD11B-201ENST00000607707 90 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 AC093913.1-201ENST00000614178 329 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 AC090517.2-201ENST00000614966 680 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 AC008873.1-201ENST00000625051 138 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 MIR3688-2-201ENST00000636963 87 ntBASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
CLCF1Q9UBD9 MIR126-201ENST00000362291 85 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 snoU2-30.2-201ENST00000362805 70 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 RNU5F-3P-201ENST00000363767 117 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 SNORA63D-201ENST00000364359 132 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 RNU6-596P-201ENST00000365395 98 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 RNU6-338P-201ENST00000383888 105 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 SNORA67.2-201ENST00000384300 149 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 RNU6-831P-201ENST00000384548 107 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 MIR515-2-201ENST00000384883 83 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 MIR515-1-201ENST00000384884 83 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 MIR1253-201ENST00000408273 105 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 RNU6-955P-201ENST00000410497 104 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 RNU6-57P-201ENST00000411348 103 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 AC007098.1-201ENST00000420122 367 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 MTATP6P13-201ENST00000438531 667 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 RPL26P26-201ENST00000480251 434 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 RPS29P25-201ENST00000481709 171 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 AC005840.1-201ENST00000498412 377 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 Y_RNA.676-201ENST00000516393 96 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 SNORA25.14-201ENST00000516481 132 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 RNU6-273P-201ENST00000516937 96 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 RNU1-117P-201ENST00000517041 158 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 snoZ196.1-201ENST00000625269 89 ntBASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
CLCF1Q9UBD9 Y_RNA.6-201ENST00000362350 114 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 RNU1-62P-201ENST00000362599 164 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 RNY1P10-201ENST00000363268 113 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms