Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 AC005899.2-201ENST00000584353 90 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 AL158827.2-201ENST00000602494 330 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.15-201ENST00000611544 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.16-201ENST00000613119 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.12-201ENST00000613778 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.20-201ENST00000613956 192 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.9-201ENST00000615427 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.11-201ENST00000616345 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.2-201ENST00000616535 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.3-201ENST00000617785 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.19-201ENST00000618602 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 RNU2-1-201ENST00000618664 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.6-201ENST00000619225 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.5-201ENST00000619465 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 U2.10-201ENST00000620268 191 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 AL691447.3-201ENST00000635020 330 ntBASIC1.7□□□□□ -2.14
CHCHD3Q9NX63 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 RNU6-1266P-201ENST00000362794 105 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 RNU6-1240P-201ENST00000365155 104 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.482-201ENST00000384377 111 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 RNU6-950P-201ENST00000384651 107 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 SNORA3.2-201ENST00000408221 125 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 RN7SKP223-201ENST00000410582 62 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 OOSP1P1-201ENST00000423265 274 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 AC016717.1-201ENST00000448918 286 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 AC084364.2-201ENST00000546924 395 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 MIR3618-201ENST00000580330 88 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 AC011494.1-201ENST00000596454 237 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.166-201ENST00000363730 102 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.179-201ENST00000363844 90 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 MIR487A-201ENST00000385009 80 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 RNU6-700P-201ENST00000391043 107 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 MIR1267-201ENST00000408723 78 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 RNU2-20P-201ENST00000410425 191 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 RNA5SP504-201ENST00000410676 117 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 USP9YP16-201ENST00000430287 407 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 HMGN2P34-201ENST00000437647 269 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 HSPE1P9-201ENST00000440046 311 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 JTBP1-201ENST00000441314 247 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 HSPE1P24-201ENST00000450782 238 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 USP9YP23-201ENST00000455085 407 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 RPL26P26-201ENST00000480251 434 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 AC116353.2-201ENST00000505332 712 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 AC018710.1-201ENST00000506509 158 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.708-201ENST00000516950 96 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 AC025647.1-201ENST00000517879 253 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 AC005668.1-201ENST00000571142 476 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 AC016925.2-201ENST00000605108 242 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 AC126177.8-201ENST00000618339 1015 ntBASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
CHCHD3Q9NX63 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.405-201ENST00000383979 100 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.451-201ENST00000384200 100 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 RNU6-842P-201ENST00000384269 107 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.524-201ENST00000384564 100 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.561-201ENST00000384694 100 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 MTCYBP10-201ENST00000424905 650 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 UBE2V1P7-201ENST00000446395 340 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 snoU13.9-201ENST00000458927 103 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 AC026782.1-201ENST00000512952 449 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 MTND4LP26-201ENST00000518144 282 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 AC090617.3-201ENST00000573670 475 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 MIR4419B-201ENST00000577260 68 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 MIR5701-3-201ENST00000578890 82 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 MIR3684-201ENST00000579779 74 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 MIR5701-1-201ENST00000585138 82 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 AC022432.1-201ENST00000595739 310 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 AC010999.1-201ENST00000611856 324 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 MIR5701-2-201ENST00000615634 82 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 AC006001.4-201ENST00000622243 395 ntBASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
CHCHD3Q9NX63 MIR424-201ENST00000362227 98 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 SNORD33-201ENST00000362761 85 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 SNORD48-201ENST00000364953 64 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 RNU6-338P-201ENST00000383888 105 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 RNU6-767P-201ENST00000384132 107 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 RNU6-601P-201ENST00000384540 107 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 MIR10B-201ENST00000385011 110 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 MIR548F5-201ENST00000408421 86 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 MIR1185-2-201ENST00000408687 86 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 RPL37P10-201ENST00000412884 288 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 RPL30P16-201ENST00000419341 429 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 TOMM22P2-201ENST00000430735 237 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms