Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.33□□□□□ -2.2
TM9SF3Q9HD45 AC121333.1-201ENST00000567488 2709 ntBASIC1.33□□□□□ -2.2
TM9SF3Q9HD45 Y_RNA.132-201ENST00000363421 102 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 RNU6-1286P-201ENST00000383871 107 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 RNU6-933P-201ENST00000384424 107 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 RNU6-790P-201ENST00000384479 105 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 Y_RNA.516-201ENST00000384541 124 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 RNU6-95P-201ENST00000384697 107 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 RPS27P16-201ENST00000425758 201 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 MTCO3P29-201ENST00000432119 779 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AC099677.2-201ENST00000436385 175 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 Z82188.1-201ENST00000436709 154 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AC016717.1-201ENST00000448918 286 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 MTCO3P8-201ENST00000453691 755 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AC016925.1-201ENST00000458303 298 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 MTCO1P29-201ENST00000496868 288 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 MIR4452-201ENST00000583004 71 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 MIR3672-201ENST00000584290 82 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AC064807.4-201ENST00000607201 407 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 AL133215.3-201ENST00000609801 448 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.32□□□□□ -2.2
TM9SF3Q9HD45 RNU6-862P-201ENST00000362804 105 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 RNU4-12P-201ENST00000365233 139 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 RNU6-203P-201ENST00000384038 104 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 RNU6-306P-201ENST00000384617 107 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 MIR489-201ENST00000384923 84 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 MRPL35P1-201ENST00000404272 572 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 AC004386.2-201ENST00000441858 148 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 snoU13.30-201ENST00000458951 104 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 AC105313.1-201ENST00000509121 353 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 RNU6-1041P-201ENST00000516254 102 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 AC019176.1-201ENST00000518519 225 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 AP003033.1-201ENST00000527244 415 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 TPRKBP2-201ENST00000565969 475 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 AC100830.2-201ENST00000581636 240 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 MIR5006-201ENST00000583027 110 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 AC097065.2-201ENST00000608159 533 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 MIR8076-201ENST00000611401 83 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.31□□□□□ -2.2
TM9SF3Q9HD45 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 SNORD50.1-201ENST00000362987 71 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 Y_RNA.100-201ENST00000363141 102 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 MIR548F1-201ENST00000408667 84 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 RPL37P10-201ENST00000412884 288 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 AL161935.2-201ENST00000414627 60 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 snoU13.18-201ENST00000459483 104 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 RPL23AP75-201ENST00000491601 451 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 AL163195.1-201ENST00000496941 348 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 TRBVA-201ENST00000498804 316 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 RNU6-256P-201ENST00000516747 97 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 FGF7P1-201ENST00000582820 288 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 SNORA4-201ENST00000584302 138 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 AL138726.1-201ENST00000614873 333 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 AC005562.2-201ENST00000618264 111 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 AL136221.1-201ENST00000621449 509 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 AC100810.6-201ENST00000638068 285 ntBASIC1.3□□□□□ -2.2
TM9SF3Q9HD45 SNORA33-201ENST00000363664 130 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 RNU1-96P-201ENST00000364163 162 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 Y_RNA.402-201ENST00000383972 102 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 MIR517A-201ENST00000385001 87 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 SNORD115-47-201ENST00000391226 86 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 EIF1P1-201ENST00000421436 341 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 AC060773.1-201ENST00000421698 310 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 RPL31P58-201ENST00000469001 379 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 AC109635.3-201ENST00000529536 185 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 AP000907.4-201ENST00000604143 237 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.29□□□□□ -2.2
TM9SF3Q9HD45 ZNF204P-201ENST00000416749 2397 ntBASIC1.28□□□□□ -2.2
TM9SF3Q9HD45 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TM9SF3Q9HD45 RNU1-22P-201ENST00000363334 158 ntBASIC1.28□□□□□ -2.2
TM9SF3Q9HD45 Y_RNA.212-201ENST00000364177 102 ntBASIC1.28□□□□□ -2.2
TM9SF3Q9HD45 SNORD114-22-201ENST00000365423 72 ntBASIC1.28□□□□□ -2.2
TM9SF3Q9HD45 RNU6-784P-201ENST00000384330 106 ntBASIC1.28□□□□□ -2.2
TM9SF3Q9HD45 SNORD116-4-201ENST00000384733 96 ntBASIC1.28□□□□□ -2.2
TM9SF3Q9HD45 AC245047.4-201ENST00000433189 144 ntBASIC1.28□□□□□ -2.2
TM9SF3Q9HD45 OR2AQ1P-201ENST00000451972 200 ntBASIC1.28□□□□□ -2.2
TM9SF3Q9HD45 AC079354.2-201ENST00000453523 154 ntBASIC1.28□□□□□ -2.2
TM9SF3Q9HD45 PCMTD1P1-201ENST00000455560 355 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms