Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
NXF3Q9H4D5 PDCL2P1-201ENST00000419302 352 ntBASIC1.47□□□□□ -2.17
NXF3Q9H4D5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.47□□□□□ -2.17
NXF3Q9H4D5 USP9YP30-201ENST00000430729 455 ntBASIC1.47□□□□□ -2.17
NXF3Q9H4D5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.47□□□□□ -2.17
NXF3Q9H4D5 AL035666.1-201ENST00000446195 348 ntBASIC1.47□□□□□ -2.17
NXF3Q9H4D5 HMGN2P18-201ENST00000450680 270 ntBASIC1.47□□□□□ -2.17
NXF3Q9H4D5 AC004223.1-201ENST00000479840 271 ntBASIC1.47□□□□□ -2.17
NXF3Q9H4D5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.47□□□□□ -2.17
NXF3Q9H4D5 SNORA20.3-201ENST00000516880 132 ntBASIC1.47□□□□□ -2.17
NXF3Q9H4D5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.47□□□□□ -2.17
NXF3Q9H4D5 AC090517.1-201ENST00000569307 266 ntBASIC1.47□□□□□ -2.17
NXF3Q9H4D5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.47□□□□□ -2.17
NXF3Q9H4D5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.47□□□□□ -2.17
NXF3Q9H4D5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.47□□□□□ -2.17
NXF3Q9H4D5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
NXF3Q9H4D5 RNU4-9P-201ENST00000364951 139 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 Y_RNA.390-201ENST00000383932 102 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 SNORA48.1-201ENST00000390879 135 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 MIR548F5-201ENST00000408421 86 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 AC243428.1-201ENST00000421099 264 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 RPS3AP52-201ENST00000435639 297 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.46□□□□□ -2.18
NXF3Q9H4D5 AC107399.1-201ENST00000451226 265 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 RNU1-123P-201ENST00000458950 160 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 RNA5SP57-201ENST00000459463 123 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.46□□□□□ -2.18
NXF3Q9H4D5 ATP5EP1-201ENST00000510257 156 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 AC026782.1-201ENST00000512952 449 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 Y_RNA.691-201ENST00000516611 103 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 RNU6-1098P-201ENST00000516772 96 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 RNA5SP490-201ENST00000517141 136 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.46□□□□□ -2.18
NXF3Q9H4D5 AC026470.2-201ENST00000561492 181 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 AC005668.1-201ENST00000571142 476 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 RBM11P1-201ENST00000604951 799 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 AC018462.2-201ENST00000605375 395 ntBASIC1.46□□□□□ -2.18
NXF3Q9H4D5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.46□□□□□ -2.18
NXF3Q9H4D5 RNU6-1059P-201ENST00000363752 98 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 SNORD115-8-201ENST00000363856 82 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 Y_RNA.184-201ENST00000363884 108 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 SNORD31B-201ENST00000364977 69 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 SNORD115-38-201ENST00000365037 82 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 RNU6-842P-201ENST00000384269 107 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 Z82188.1-201ENST00000436709 154 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.45□□□□□ -2.18
NXF3Q9H4D5 snoU13.30-201ENST00000458951 104 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 RNU1-98P-201ENST00000458992 160 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 FO393415.2-201ENST00000480085 343 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 RPS23P5-201ENST00000495419 428 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 HMGN1P12-201ENST00000499125 195 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 AC116353.2-201ENST00000505332 712 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 RNU5F-4P-201ENST00000516581 114 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 RNU6-1016P-201ENST00000516689 94 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 DEFB131C-201ENST00000528817 165 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 MIR4801-201ENST00000582704 82 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 MIR4273-201ENST00000582824 84 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 AC016727.2-201ENST00000603988 621 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.45□□□□□ -2.18
NXF3Q9H4D5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
NXF3Q9H4D5 BX322639.1-202ENST00000423987 2213 ntBASIC1.45□□□□□ -2.18
NXF3Q9H4D5 Y_RNA.88-201ENST00000363029 99 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 SNORD81.2-201ENST00000365153 76 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 SNORA18.2-201ENST00000383865 132 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 RNU6-203P-201ENST00000384038 104 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 Y_RNA.482-201ENST00000384377 111 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 Y_RNA.490-201ENST00000384413 102 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 RNA5SP501-201ENST00000410990 112 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 RPL37P10-201ENST00000412884 288 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 NCOR1P3-201ENST00000420479 303 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 AC098614.3-201ENST00000438957 440 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 RPS29P29-201ENST00000456396 171 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 RNU7-14P-201ENST00000459331 62 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 TOMM22P6-201ENST00000465035 409 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 AC103851.1-201ENST00000506833 274 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 AP005660.1-201ENST00000522972 293 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.44□□□□□ -2.18
NXF3Q9H4D5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.44□□□□□ -2.18
NXF3Q9H4D5 AC016925.2-201ENST00000605108 242 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 AC005562.2-201ENST00000618264 111 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 AC130454.1-201ENST00000622948 401 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 ZNF299P-201ENST00000406845 1804 ntBASIC1.44□□□□□ -2.18
NXF3Q9H4D5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
NXF3Q9H4D5 RNU6-23P-201ENST00000363283 107 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 RNU6-137P-201ENST00000363680 108 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 RNU6-595P-201ENST00000363944 107 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 Y_RNA.533-201ENST00000384596 114 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 MIR597-201ENST00000384968 97 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 MIR30A-201ENST00000385092 71 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 MIR153-2-201ENST00000385225 87 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 AC123900.1-201ENST00000420390 96 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 MTND3P10-201ENST00000450967 341 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.43□□□□□ -2.18
NXF3Q9H4D5 AC016925.1-201ENST00000458303 298 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.43□□□□□ -2.18
NXF3Q9H4D5 RNU6-1198P-201ENST00000516904 67 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 RNA5SP54-201ENST00000516951 92 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms