Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 FER-210ENST00000628534 558 ntTSL 5 BASIC0.43□□□□□ -2.34
VCX3BQ9H321 AC023934.1-201ENST00000574529 2389 ntBASIC0.43□□□□□ -2.34
VCX3BQ9H321 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
VCX3BQ9H321 RNU6-1120P-201ENST00000362988 108 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 Y_RNA.140-201ENST00000363474 103 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 Y_RNA.201-201ENST00000364052 96 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 SNORA75.2-201ENST00000391138 150 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 SNORA75.3-201ENST00000391231 150 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
VCX3BQ9H321 AL451046.2-201ENST00000403074 277 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 MIR320B2-201ENST00000408479 138 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 MTCYBP8-201ENST00000422855 651 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 MTCO2P11-201ENST00000431069 680 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.42□□□□□ -2.34
VCX3BQ9H321 MTCO3P18-201ENST00000440206 761 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 AC073415.1-201ENST00000449240 153 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.42□□□□□ -2.34
VCX3BQ9H321 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 APOOP3-201ENST00000536787 586 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 AL162424.1-201ENST00000602325 221 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 SNORD11B-201ENST00000607707 90 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 AL136370.1-201ENST00000608166 691 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 AC122133.1-201ENST00000613964 233 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 OR5AK4P-201ENST00000635912 903 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 ZNF204P-201ENST00000416749 2397 ntBASIC0.42□□□□□ -2.34
VCX3BQ9H321 Y_RNA.159-201ENST00000363674 87 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 RNU6-1335P-201ENST00000365426 107 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
VCX3BQ9H321 AL049545.1-201ENST00000401856 572 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.41□□□□□ -2.34
VCX3BQ9H321 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.41□□□□□ -2.34
VCX3BQ9H321 STAG3L5P-204ENST00000443759 179 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 RNU7-63P-201ENST00000459054 62 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 RNU7-21P-201ENST00000459430 62 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 RNU7-94P-201ENST00000459576 63 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.41□□□□□ -2.34
VCX3BQ9H321 RNU6-947P-201ENST00000516264 106 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 RNU7-99P-201ENST00000516271 62 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 MTND1P5-201ENST00000517906 940 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.41□□□□□ -2.34
VCX3BQ9H321 MTND4P7-201ENST00000523876 130 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
VCX3BQ9H321 AC007834.2-201ENST00000536310 343 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 AL137100.2-201ENST00000555786 315 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 MIR3913-1-201ENST00000577744 102 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 AL357312.1-201ENST00000603879 298 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 AC027449.1-201ENST00000608890 407 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 U6.73-201ENST00000619194 103 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 AC137590.2-201ENST00000619709 240 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 AC022960.3-201ENST00000619794 441 ntBASIC0.41□□□□□ -2.34
VCX3BQ9H321 AL390237.1-201ENST00000404226 1415 ntBASIC0.4□□□□□ -2.34
VCX3BQ9H321 RNU6-53P-201ENST00000365367 106 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 RNU6-1329P-201ENST00000365664 107 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.4□□□□□ -2.35
VCX3BQ9H321 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
VCX3BQ9H321 MIR764-201ENST00000390811 85 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 FGF7P8-201ENST00000402994 292 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 AL035398.1-201ENST00000430869 322 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 RPL39P39-201ENST00000455840 151 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 SNRPGP9-201ENST00000456025 225 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 TPT1P7-201ENST00000458300 517 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 snoU13.25-201ENST00000458945 104 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.4□□□□□ -2.35
VCX3BQ9H321 RNU6-189P-201ENST00000516120 101 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 RN7SKP265-201ENST00000516448 223 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 RNU6-430P-201ENST00000517078 107 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 AK6P2-201ENST00000549020 471 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.4□□□□□ -2.35
VCX3BQ9H321 FRG2DP-202ENST00000566967 323 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 AC133485.1-201ENST00000567176 124 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 AC138907.6-201ENST00000568401 126 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 MIR3915-201ENST00000578518 97 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 MIR4424-201ENST00000585257 86 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.4□□□□□ -2.35
VCX3BQ9H321 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 AL353765.1-201ENST00000605514 183 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.4□□□□□ -2.35
VCX3BQ9H321 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.35
VCX3BQ9H321 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
VCX3BQ9H321 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.4□□□□□ -2.35
VCX3BQ9H321 RNU6-996P-201ENST00000365438 107 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.39□□□□□ -2.35
VCX3BQ9H321 RNU6-245P-201ENST00000384020 107 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 RNU6-784P-201ENST00000384330 106 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 RNU6-424P-201ENST00000384367 105 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 SNORD116-13-201ENST00000384408 92 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 RNY3P10-201ENST00000384764 102 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AL606923.1-201ENST00000406616 190 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.39□□□□□ -2.35
VCX3BQ9H321 MTND2P18-201ENST00000419962 1030 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.39□□□□□ -2.35
VCX3BQ9H321 CALM2P4-201ENST00000430810 426 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AL358934.1-201ENST00000432346 324 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AL031667.1-201ENST00000440222 725 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AC244505.5-201ENST00000443639 207 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 MTCO2P7-201ENST00000446518 666 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.39□□□□□ -2.35
VCX3BQ9H321 RNU7-90P-201ENST00000459216 62 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms