Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 Y_RNA.144-201ENST00000363521 113 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 RNU6-961P-201ENST00000363893 105 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 Y_RNA.230-201ENST00000364348 109 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 RNU6-1264P-201ENST00000383891 107 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 RNU6-20P-201ENST00000384106 107 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 Y_RNA.462-201ENST00000384268 102 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 SNORA67.2-201ENST00000384300 149 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 RNU6-196P-201ENST00000384315 107 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 MIR9-1-201ENST00000385198 89 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 RNA5SP475-201ENST00000410568 110 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 RNU5A-5P-201ENST00000411054 116 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 ELOCP21-201ENST00000412558 336 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 AL390729.2-201ENST00000416137 156 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 AC005002.2-201ENST00000438228 269 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 IPO7P1-201ENST00000442031 636 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 HMGN2P18-201ENST00000450680 270 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 NDUFB4P10-201ENST00000452541 359 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 AL137159.1-201ENST00000452808 512 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 HMGN2P9-201ENST00000476875 229 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 SRIP1-201ENST00000489235 288 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 MIR4635-201ENST00000583759 79 ntBASIC2.62□□□□□ -1.99
TRIM54Q9BYV2 RNU6-937P-201ENST00000384325 106 ntBASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 TOMM22P2-201ENST00000430735 237 ntBASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 AC016925.1-201ENST00000458303 298 ntBASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 AC018868.1-201ENST00000491307 315 ntBASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 RNU6-991P-201ENST00000516168 107 ntBASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 AK6P2-201ENST00000549020 471 ntBASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 MIR3674-201ENST00000636576 68 ntBASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM54Q9BYV2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 RNU2-48P-201ENST00000410694 191 ntBASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 AC105272.1-201ENST00000438604 198 ntBASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 LINC01399-202ENST00000458450 244 ntBASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 MIR4300-201ENST00000581016 96 ntBASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 RPL12P50-201ENST00000603116 116 ntBASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 7SK.10-201ENST00000621414 298 ntBASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 U6.104-201ENST00000637979 90 ntBASIC2.6□□□□□ -1.99
TRIM54Q9BYV2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 Y_RNA.64-201ENST00000362845 102 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 RNA5SP393-201ENST00000363423 117 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 RNU1-112P-201ENST00000364401 164 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 DEFA7P-201ENST00000382676 285 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 SNORD63-201ENST00000384262 68 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 Y_RNA.510-201ENST00000384511 114 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 RNU6-21P-201ENST00000384710 107 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 RNU2-20P-201ENST00000410425 191 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 AC025465.3-201ENST00000510570 311 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 AC096725.1-201ENST00000514266 313 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 RNU7-110P-201ENST00000516891 62 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 AP003733.2-201ENST00000529409 171 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 AC136932.1-201ENST00000574771 208 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 AL109918.3-201ENST00000603072 338 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 AC025754.2-201ENST00000606491 432 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 AC011373.1-201ENST00000607270 237 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.59□□□□□ -1.99
TRIM54Q9BYV2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
TRIM54Q9BYV2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRIM54Q9BYV2 MIR410-201ENST00000362222 80 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 RNU6-463P-201ENST00000384340 107 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 Y_RNA.512-201ENST00000384518 102 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 MIR548B-201ENST00000385247 97 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 SNORD115-46-201ENST00000390982 71 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM54Q9BYV2 SRIP3-201ENST00000413200 219 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 COTL1P1-201ENST00000422309 375 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.58□□□□□ -2
TRIM54Q9BYV2 AC107083.1-201ENST00000439643 279 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 RNU7-57P-201ENST00000459540 60 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 AC093259.1-201ENST00000509755 300 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
TRIM54Q9BYV2 SNORA4.4-201ENST00000515921 135 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 PRELID2P1-201ENST00000552837 301 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 AL161670.1-201ENST00000554348 137 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.58□□□□□ -2
TRIM54Q9BYV2 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.58□□□□□ -2
TRIM54Q9BYV2 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 RNU6-806P-201ENST00000365147 105 ntBASIC2.57□□□□□ -2
TRIM54Q9BYV2 RNU6-1175P-201ENST00000365200 107 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms