Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 HMGN2P26-201ENST00000463169 339 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 AC026616.1-201ENST00000523157 525 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 MTCO3P15-201ENST00000526563 574 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 RNU6-562P-201ENST00000362731 107 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 SNORA18.1-201ENST00000363418 128 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 RNU6-756P-201ENST00000383997 107 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 RNU6-975P-201ENST00000384296 105 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 RNU6-424P-201ENST00000384367 105 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 MIR520G-201ENST00000385064 90 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 MIR520H-201ENST00000385126 88 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 MTCO1P17-201ENST00000411522 491 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 RNU7-56P-201ENST00000458744 62 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 SNRPGP7-201ENST00000469016 106 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 AC079382.1-201ENST00000493346 557 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 RNA5SP94-201ENST00000516917 108 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 AC092104.1-201ENST00000497346 1441 ntBASIC-0.62□□□□□ -2.51
SCAPERQ9BY12 SNORA8.2-201ENST00000384372 139 ntBASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 MIR892B-201ENST00000401279 77 ntBASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 AL049829.1-201ENST00000465411 156 ntBASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 AP000870.1-201ENST00000472927 406 ntBASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 RNY1P9-201ENST00000532431 109 ntBASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 AK6P2-201ENST00000549020 471 ntBASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 MIR548AC-201ENST00000585049 88 ntBASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 AC006157.1-201ENST00000611750 366 ntBASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.63□□□□□ -2.51
SCAPERQ9BY12 RNY3P5-201ENST00000384127 102 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 U8.16-201ENST00000391279 133 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 AP000542.1-201ENST00000448473 371 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 RNU6-138P-201ENST00000515952 107 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 AP002453.2-201ENST00000533503 320 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 MIR548AO-201ENST00000579992 96 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 AC009994.1-201ENST00000606889 253 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 RNU6-946P-201ENST00000383878 107 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 SNORD75.1-201ENST00000408373 60 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 RPS3AP3-201ENST00000411933 242 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 MRPS10P2-201ENST00000431226 381 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 AC005002.2-201ENST00000438228 269 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 AL445435.1-201ENST00000604232 665 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 AL359697.1-201ENST00000624879 587 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 U4.7-201ENST00000638126 106 ntBASIC-0.64□□□□□ -2.51
SCAPERQ9BY12 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 PCNPP3-201ENST00000393579 471 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 MTND3P17-201ENST00000416968 344 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 TIMM9P2-201ENST00000419324 266 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 CALM2P4-201ENST00000430810 426 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 MTND4P15-201ENST00000437913 1033 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 AC016632.1-201ENST00000503994 196 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 AC010468.3-201ENST00000508225 458 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 RNU7-12P-201ENST00000516030 62 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 AC078795.3-201ENST00000602913 472 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 Z99497.2-201ENST00000603634 310 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 AC005520.5-201ENST00000613926 164 ntBASIC-0.65□□□□□ -2.51
SCAPERQ9BY12 MIR16-2-201ENST00000362117 81 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 SNORD14C-201ENST00000365382 88 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 MIR196A2-201ENST00000385189 110 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 MIR549A-201ENST00000385268 96 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 RNU6-127P-201ENST00000390897 107 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 HSFY5P-201ENST00000453726 309 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 SNORD126-201ENST00000459475 77 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 RNU7-94P-201ENST00000459576 63 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 AC104072.1-201ENST00000568817 668 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 FTX_2.1-201ENST00000618816 94 ntBASIC-0.66□□□□□ -2.52
SCAPERQ9BY12 RNY4P24-201ENST00000362735 96 ntBASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 SNORA26.3-201ENST00000391119 136 ntBASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 MTCO2P8-201ENST00000412213 658 ntBASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 AC006366.1-201ENST00000422002 759 ntBASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 AL353997.1-201ENST00000432936 108 ntBASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 RN7SKP164-201ENST00000516138 266 ntBASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 RNU2-46P-201ENST00000517038 113 ntBASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 Z99289.3-201ENST00000605586 594 ntBASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 AL359547.2-201ENST00000615810 418 ntBASIC-0.67□□□□□ -2.52
SCAPERQ9BY12 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 RNU6-960P-201ENST00000364056 120 ntBASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 RNU6-650P-201ENST00000365658 111 ntBASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 RPL23AP30-201ENST00000432419 501 ntBASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 MTATP6P23-201ENST00000440153 476 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms