Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 MIR1267-201ENST00000408723 78 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 Z82188.1-201ENST00000436709 154 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 MTATP6P13-201ENST00000438531 667 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.39□□□□□ -2.19
CITED1Q99966 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.39□□□□□ -2.19
CITED1Q99966 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.39□□□□□ -2.19
CITED1Q99966 RNU6-498P-201ENST00000459468 107 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 RNU7-57P-201ENST00000459540 60 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 HMGN2P9-201ENST00000476875 229 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 FO393415.2-201ENST00000480085 343 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 RNU1-54P-201ENST00000517181 120 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.39□□□□□ -2.19
CITED1Q99966 DNAJC19P9-201ENST00000555084 351 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.39□□□□□ -2.19
CITED1Q99966 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 AC126177.8-201ENST00000618339 1015 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 AL078596.1-201ENST00000624856 447 ntBASIC1.39□□□□□ -2.19
CITED1Q99966 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
CITED1Q99966 MIR302D-201ENST00000362275 68 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 SNORD115-32-201ENST00000364079 82 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 SNORA25.9-201ENST00000365087 128 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 Y_RNA.319-201ENST00000365138 92 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 RNU6-831P-201ENST00000384548 107 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 MIR1253-201ENST00000408273 105 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 MIR548F1-201ENST00000408667 84 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.38□□□□□ -2.19
CITED1Q99966 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.38□□□□□ -2.19
CITED1Q99966 MTCO3P29-201ENST00000432119 779 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 FTH1P12-201ENST00000432137 551 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 PPP1R2P5-201ENST00000457256 603 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 RPL26P26-201ENST00000480251 434 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 SNORA25.14-201ENST00000516481 132 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 RNU6-344P-201ENST00000516635 111 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 RNU6-902P-201ENST00000517212 91 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 AC084364.2-201ENST00000546924 395 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 SNORA77B-201ENST00000578179 125 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.38□□□□□ -2.19
CITED1Q99966 MIR4303-201ENST00000581299 66 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 AL512598.1-201ENST00000610158 273 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 AC006001.4-201ENST00000622243 395 ntBASIC1.38□□□□□ -2.19
CITED1Q99966 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CITED1Q99966 AL161722.3-201ENST00000605789 2983 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 RNU6-245P-201ENST00000384020 107 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 RNU6-57P-201ENST00000411348 103 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 AC007098.1-201ENST00000420122 367 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 CST2P1-201ENST00000425770 87 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 HSPE1P9-201ENST00000440046 311 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 JTBP1-201ENST00000441314 247 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 AC099513.1-201ENST00000490423 301 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 RNU6-1146P-201ENST00000516282 102 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 RNU6-566P-201ENST00000516790 107 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 RNU6-1088P-201ENST00000516850 104 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 RNU6-58P-201ENST00000517143 103 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 RNA5SP454-201ENST00000517231 127 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.37□□□□□ -2.19
CITED1Q99966 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.37□□□□□ -2.19
CITED1Q99966 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.37□□□□□ -2.19
CITED1Q99966 SNORD11B-201ENST00000607707 90 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CITED1Q99966 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.37□□□□□ -2.19
CITED1Q99966 AC073869.6-201ENST00000640656 341 ntBASIC1.37□□□□□ -2.19
CITED1Q99966 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CITED1Q99966 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.37□□□□□ -2.19
CITED1Q99966 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CITED1Q99966 MTND5P10-201ENST00000603719 1809 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 SNORD115-8-201ENST00000363856 82 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 Y_RNA.796-201ENST00000364268 102 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 Y_RNA.799-201ENST00000364992 102 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 SNORD115-38-201ENST00000365037 82 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.36□□□□□ -2.19
CITED1Q99966 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.36□□□□□ -2.19
CITED1Q99966 RPL30P16-201ENST00000419341 429 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 AL139396.1-201ENST00000421137 167 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.36□□□□□ -2.19
CITED1Q99966 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.36□□□□□ -2.19
CITED1Q99966 HMGN2P34-201ENST00000437647 269 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 AC069257.2-201ENST00000441819 155 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 RPS26P55-201ENST00000471178 356 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.36□□□□□ -2.19
CITED1Q99966 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.36□□□□□ -2.19
CITED1Q99966 RNU7-175P-201ENST00000515915 61 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 MIR6128-201ENST00000615528 109 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 MIR338-201ENST00000636369 67 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 AC068205.3-201ENST00000636385 468 ntBASIC1.36□□□□□ -2.19
CITED1Q99966 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
CITED1Q99966 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CITED1Q99966 Y_RNA.118-201ENST00000363300 101 ntBASIC1.35□□□□□ -2.19
CITED1Q99966 Y_RNA.355-201ENST00000365462 98 ntBASIC1.35□□□□□ -2.19
CITED1Q99966 RNU6-360P-201ENST00000390944 104 ntBASIC1.35□□□□□ -2.19
CITED1Q99966 AL117342.1-201ENST00000404861 406 ntBASIC1.35□□□□□ -2.19
CITED1Q99966 AL445305.1-201ENST00000432577 575 ntBASIC1.35□□□□□ -2.19
CITED1Q99966 AC245047.4-201ENST00000433189 144 ntBASIC1.35□□□□□ -2.19
CITED1Q99966 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.35□□□□□ -2.19
CITED1Q99966 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
CITED1Q99966 RPL30P10-201ENST00000488148 337 ntBASIC1.35□□□□□ -2.19
CITED1Q99966 RNU4-49P-201ENST00000516080 140 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms