Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC007215.1-201ENST00000464893 276 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.24□□□□□ -2.21
FOXC2Q99958 RNU6-1098P-201ENST00000516772 96 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 RNU6-1088P-201ENST00000516850 104 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 SUMO2P18-201ENST00000518873 252 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 DEFB131C-201ENST00000528817 165 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.24□□□□□ -2.21
FOXC2Q99958 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.24□□□□□ -2.21
FOXC2Q99958 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.24□□□□□ -2.21
FOXC2Q99958 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.24□□□□□ -2.21
FOXC2Q99958 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.24□□□□□ -2.21
FOXC2Q99958 AP003465.2-201ENST00000602571 373 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 AP001485.1-201ENST00000604799 199 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 PVT1_3.1-201ENST00000620853 95 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 AC098679.4-201ENST00000624241 654 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.24□□□□□ -2.21
FOXC2Q99958 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
FOXC2Q99958 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
FOXC2Q99958 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
FOXC2Q99958 Y_RNA.151-201ENST00000363566 112 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 RNU6-877P-201ENST00000383868 107 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 MIR598-201ENST00000384868 97 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 Y_RNA.599-201ENST00000410489 109 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 RPL21P111-201ENST00000418453 477 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.23□□□□□ -2.21
FOXC2Q99958 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.23□□□□□ -2.21
FOXC2Q99958 RNU7-14P-201ENST00000459331 62 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 RPL26P26-201ENST00000480251 434 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 AF186996.7-201ENST00000492781 209 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.23□□□□□ -2.21
FOXC2Q99958 RNU6-1223P-201ENST00000517124 104 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
FOXC2Q99958 AL137100.2-201ENST00000555786 315 ntBASIC1.23□□□□□ -2.21
FOXC2Q99958 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.23□□□□□ -2.21
FOXC2Q99958 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.23□□□□□ -2.21
FOXC2Q99958 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.23□□□□□ -2.21
FOXC2Q99958 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.23□□□□□ -2.21
FOXC2Q99958 MIR96-201ENST00000362288 78 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 RNU6-562P-201ENST00000362731 107 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 RNU1-22P-201ENST00000363334 158 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 Y_RNA.123-201ENST00000363338 102 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
FOXC2Q99958 MIR1267-201ENST00000408723 78 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 RNU6-955P-201ENST00000410497 104 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 FCF1P9-201ENST00000412546 282 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 EBAG9P1-201ENST00000418955 543 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 JTBP1-201ENST00000441314 247 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.22□□□□□ -2.21
FOXC2Q99958 HSPE1P24-201ENST00000450782 238 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.22□□□□□ -2.21
FOXC2Q99958 AC092989.1-201ENST00000481235 277 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 RPL23AP75-201ENST00000491601 451 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 AC069439.1-201ENST00000494739 167 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 RNU6-718P-201ENST00000516166 105 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 RNU5F-4P-201ENST00000516581 114 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 RNU6-902P-201ENST00000517212 91 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 AP000907.4-201ENST00000604143 237 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 MIR3976-201ENST00000606807 139 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 AC009033.1-201ENST00000624279 431 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 AL133216.2-202ENST00000634512 349 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 MIR3662-201ENST00000637030 95 ntBASIC1.22□□□□□ -2.21
FOXC2Q99958 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
FOXC2Q99958 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
FOXC2Q99958 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
FOXC2Q99958 RNU6-596P-201ENST00000365395 98 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 MIR520A-201ENST00000384862 85 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
FOXC2Q99958 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.21□□□□□ -2.22
FOXC2Q99958 FTH1P12-201ENST00000432137 551 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 AC099677.2-201ENST00000436385 175 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.21□□□□□ -2.22
FOXC2Q99958 HSPE1P9-201ENST00000440046 311 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 MTND1P17-201ENST00000448961 204 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 AC007395.1-201ENST00000451333 677 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 AC016925.1-201ENST00000458303 298 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 snoU13.6-201ENST00000458785 104 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.21□□□□□ -2.22
FOXC2Q99958 AF235103.2-201ENST00000525753 346 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.21□□□□□ -2.22
FOXC2Q99958 MIR5696-201ENST00000578474 85 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.21□□□□□ -2.22
FOXC2Q99958 AC018638.8-201ENST00000588755 281 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
FOXC2Q99958 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.21□□□□□ -2.22
FOXC2Q99958 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
FOXC2Q99958 AL159152.1-201ENST00000635019 2587 ntBASIC1.21□□□□□ -2.22
FOXC2Q99958 U8.1-201ENST00000362843 134 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 RNU6-968P-201ENST00000384076 107 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 RNU6-1093P-201ENST00000391194 107 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 MIR208B-201ENST00000401172 77 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 RPL30P16-201ENST00000419341 429 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.2□□□□□ -2.22
FOXC2Q99958 DAP3P1-201ENST00000441522 278 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms