Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.75□□□□□ -1.97
SMOQ99835 AC105245.1-201ENST00000581934 244 ntBASIC2.75□□□□□ -1.97
SMOQ99835 SNORD113-5-201ENST00000607261 78 ntBASIC2.75□□□□□ -1.97
SMOQ99835 SNORD11B-201ENST00000607707 90 ntBASIC2.75□□□□□ -1.97
SMOQ99835 AC078938.1-201ENST00000620993 318 ntBASIC2.75□□□□□ -1.97
SMOQ99835 AC127459.3-201ENST00000624328 466 ntBASIC2.75□□□□□ -1.97
SMOQ99835 MIR7157-201ENST00000635801 60 ntBASIC2.75□□□□□ -1.97
SMOQ99835 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.75□□□□□ -1.97
SMOQ99835 AC010329.5-201ENST00000623497 2174 ntBASIC2.75□□□□□ -1.97
SMOQ99835 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SMOQ99835 AL136360.1-201ENST00000503377 1900 ntBASIC2.75□□□□□ -1.97
SMOQ99835 AC138915.1-201ENST00000565427 1685 ntBASIC2.75□□□□□ -1.97
SMOQ99835 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SMOQ99835 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SMOQ99835 AC135776.4-201ENST00000624300 1904 ntBASIC2.74□□□□□ -1.97
SMOQ99835 RNU4-90P-201ENST00000362773 141 ntBASIC2.74□□□□□ -1.97
SMOQ99835 Y_RNA.101-201ENST00000363154 102 ntBASIC2.74□□□□□ -1.97
SMOQ99835 RNU6-21P-201ENST00000384710 107 ntBASIC2.74□□□□□ -1.97
SMOQ99835 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SMOQ99835 RNU6-907P-201ENST00000390924 102 ntBASIC2.74□□□□□ -1.97
SMOQ99835 MIR887-201ENST00000401258 79 ntBASIC2.74□□□□□ -1.97
SMOQ99835 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.74□□□□□ -1.97
SMOQ99835 U6atac.2-201ENST00000408644 118 ntBASIC2.74□□□□□ -1.97
SMOQ99835 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.74□□□□□ -1.97
SMOQ99835 RPS23P5-201ENST00000495419 428 ntBASIC2.74□□□□□ -1.97
SMOQ99835 HMGB3P17-201ENST00000504195 649 ntBASIC2.74□□□□□ -1.97
SMOQ99835 SEPT14P8-201ENST00000508026 178 ntBASIC2.74□□□□□ -1.97
SMOQ99835 RNU6-1023P-201ENST00000516137 106 ntBASIC2.74□□□□□ -1.97
SMOQ99835 SCARNA24.2-201ENST00000516968 130 ntBASIC2.74□□□□□ -1.97
SMOQ99835 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.74□□□□□ -1.97
SMOQ99835 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.74□□□□□ -1.97
SMOQ99835 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.74□□□□□ -1.97
SMOQ99835 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMOQ99835 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SMOQ99835 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SMOQ99835 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.73□□□□□ -1.97
SMOQ99835 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SMOQ99835 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.73□□□□□ -1.97
SMOQ99835 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.73□□□□□ -1.97
SMOQ99835 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.73□□□□□ -1.97
SMOQ99835 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SMOQ99835 RNA5SP68-201ENST00000363885 119 ntBASIC2.73□□□□□ -1.97
SMOQ99835 SNORA67.2-201ENST00000384300 149 ntBASIC2.73□□□□□ -1.97
SMOQ99835 SNORD88.1-201ENST00000408684 91 ntBASIC2.73□□□□□ -1.97
SMOQ99835 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.73□□□□□ -1.97
SMOQ99835 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.73□□□□□ -1.97
SMOQ99835 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.73□□□□□ -1.97
SMOQ99835 Z96811.1-201ENST00000445880 108 ntBASIC2.73□□□□□ -1.97
SMOQ99835 RNU6-1098P-201ENST00000516772 96 ntBASIC2.73□□□□□ -1.97
SMOQ99835 MIR6817-201ENST00000615588 66 ntBASIC2.73□□□□□ -1.97
SMOQ99835 AC091932.3-201ENST00000624223 323 ntBASIC2.73□□□□□ -1.97
SMOQ99835 AC068205.3-201ENST00000636385 468 ntBASIC2.73□□□□□ -1.97
SMOQ99835 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.73□□□□□ -1.97
SMOQ99835 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.72□□□□□ -1.97
SMOQ99835 RNA5SP126-201ENST00000365092 109 ntBASIC2.72□□□□□ -1.97
SMOQ99835 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SMOQ99835 RPL19P1-201ENST00000411635 428 ntBASIC2.72□□□□□ -1.97
SMOQ99835 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
SMOQ99835 SRIP1-201ENST00000489235 288 ntBASIC2.72□□□□□ -1.97
SMOQ99835 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.72□□□□□ -1.97
SMOQ99835 RNA5SP148-201ENST00000516527 94 ntBASIC2.72□□□□□ -1.97
SMOQ99835 RNU6-586P-201ENST00000517265 104 ntBASIC2.72□□□□□ -1.97
SMOQ99835 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.72□□□□□ -1.97
SMOQ99835 MIR3668-201ENST00000582138 75 ntBASIC2.72□□□□□ -1.97
SMOQ99835 AL109918.3-201ENST00000603072 338 ntBASIC2.72□□□□□ -1.97
SMOQ99835 AC022441.3-201ENST00000605737 136 ntBASIC2.72□□□□□ -1.97
SMOQ99835 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.72□□□□□ -1.97
SMOQ99835 AC069294.1-201ENST00000608397 350 ntBASIC2.72□□□□□ -1.97
SMOQ99835 AC004467.1-201ENST00000615678 330 ntBASIC2.72□□□□□ -1.97
SMOQ99835 IGHVIII-44-202ENST00000636235 289 ntBASIC2.72□□□□□ -1.97
SMOQ99835 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.72□□□□□ -1.97
SMOQ99835 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SMOQ99835 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.72□□□□□ -1.97
SMOQ99835 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMOQ99835 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SMOQ99835 SNORD27-201ENST00000363981 72 ntBASIC2.71□□□□□ -1.98
SMOQ99835 SNORA20.1-201ENST00000364790 130 ntBASIC2.71□□□□□ -1.98
SMOQ99835 SNORA72.2-201ENST00000365028 127 ntBASIC2.71□□□□□ -1.98
SMOQ99835 Y_RNA.331-201ENST00000365267 102 ntBASIC2.71□□□□□ -1.98
SMOQ99835 Y_RNA.416-201ENST00000384014 113 ntBASIC2.71□□□□□ -1.98
SMOQ99835 Y_RNA.446-201ENST00000384178 104 ntBASIC2.71□□□□□ -1.98
SMOQ99835 RNA5SP210-201ENST00000391034 120 ntBASIC2.71□□□□□ -1.98
SMOQ99835 AL603910.2-201ENST00000407268 136 ntBASIC2.71□□□□□ -1.98
SMOQ99835 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.71□□□□□ -1.98
SMOQ99835 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.71□□□□□ -1.98
SMOQ99835 AC023141.11-201ENST00000508864 202 ntBASIC2.71□□□□□ -1.98
SMOQ99835 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.71□□□□□ -1.98
SMOQ99835 SERF1AP1-201ENST00000514575 187 ntBASIC2.71□□□□□ -1.98
SMOQ99835 RNU6-107P-201ENST00000516643 102 ntBASIC2.71□□□□□ -1.98
SMOQ99835 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.71□□□□□ -1.98
SMOQ99835 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.71□□□□□ -1.98
SMOQ99835 MIR3674-201ENST00000636576 68 ntBASIC2.71□□□□□ -1.98
SMOQ99835 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.71□□□□□ -1.98
SMOQ99835 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SMOQ99835 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SMOQ99835 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SMOQ99835 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SMOQ99835 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SMOQ99835 Y_RNA.20-201ENST00000362479 113 ntBASIC2.7□□□□□ -1.98
SMOQ99835 Y_RNA.257-201ENST00000364596 102 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 214.2 ms