Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 MIR487A-201ENST00000385009 80 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 SNORA26.8-201ENST00000391306 124 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
VAT1Q99536 AF228730.1-201ENST00000397972 663 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 AL034345.1-201ENST00000407768 123 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 AL365203.2-201ENST00000423444 196 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 AC073415.1-201ENST00000449240 153 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.67□□□□□ -2.3
VAT1Q99536 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.67□□□□□ -2.3
VAT1Q99536 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.67□□□□□ -2.3
VAT1Q99536 RNU6-344P-201ENST00000516635 111 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 AC104576.1-201ENST00000524225 88 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 AL590705.4-201ENST00000532209 134 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
VAT1Q99536 SCOCP1-201ENST00000554676 349 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 AL121579.1-201ENST00000555129 305 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 AC022432.1-201ENST00000595739 310 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 AC073349.3-201ENST00000617616 186 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 OR4G1P-203ENST00000641984 1631 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 ZNF204P-201ENST00000416749 2397 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 MIR660-201ENST00000385235 97 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 SNORD41-201ENST00000386967 70 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
VAT1Q99536 MIR450B-201ENST00000401182 78 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 RNU6-1186P-201ENST00000410429 97 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 RNA5SP504-201ENST00000410676 117 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.66□□□□□ -2.3
VAT1Q99536 RNU7-63P-201ENST00000459054 62 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 RNU1-117P-201ENST00000517041 158 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.66□□□□□ -2.3
VAT1Q99536 AC004584.2-201ENST00000570407 410 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 MIR4424-201ENST00000585257 86 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 FAM106DP-201ENST00000586416 501 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 AC080078.2-201ENST00000603766 501 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 MIR6504-201ENST00000613520 61 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 AC072046.2-201ENST00000618366 268 ntBASIC0.66□□□□□ -2.3
VAT1Q99536 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
VAT1Q99536 RNU6-1329P-201ENST00000365664 107 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 MIR200A-201ENST00000384875 90 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 MIR653-201ENST00000385279 96 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 MIR320B2-201ENST00000408479 138 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.65□□□□□ -2.31
VAT1Q99536 RPS26P48-201ENST00000491713 339 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 RNU6-947P-201ENST00000516264 106 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 AC090142.3-201ENST00000519012 385 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 AC087854.1-201ENST00000519706 414 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 AC136628.3-201ENST00000521868 290 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 AC025423.5-201ENST00000550230 219 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.65□□□□□ -2.31
VAT1Q99536 CYP3A137P-201ENST00000562436 69 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 MIR4778-201ENST00000577635 80 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 AC005609.4-201ENST00000625071 447 ntBASIC0.65□□□□□ -2.31
VAT1Q99536 FER-210ENST00000628534 558 ntTSL 5 BASIC0.65□□□□□ -2.31
VAT1Q99536 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
VAT1Q99536 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.64□□□□□ -2.31
VAT1Q99536 U6.73-201ENST00000619194 103 ntBASIC0.64□□□□□ -2.31
VAT1Q99536 AC137590.2-201ENST00000619709 240 ntBASIC0.64□□□□□ -2.31
VAT1Q99536 AC068700.1-201ENST00000565862 3754 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 SNORD114-22-201ENST00000365423 72 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.63□□□□□ -2.31
VAT1Q99536 RNU6-969P-201ENST00000383900 105 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 MIR520E-201ENST00000384867 87 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AL049545.1-201ENST00000401856 572 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AL606923.1-201ENST00000406616 190 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AL355796.1-201ENST00000406706 323 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.63□□□□□ -2.31
VAT1Q99536 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.63□□□□□ -2.31
VAT1Q99536 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.63□□□□□ -2.31
VAT1Q99536 MTCO2P18-201ENST00000457151 658 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 TPTE2P5-203ENST00000458118 728 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 MTCO3P38-201ENST00000468910 766 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 BET1P1-201ENST00000482276 359 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 RNU6-189P-201ENST00000516120 101 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 RNU7-99P-201ENST00000516271 62 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 RNU6-430P-201ENST00000517078 107 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 RNA5SP454-201ENST00000517231 127 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 MTND1P35-201ENST00000526739 508 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 FRG2DP-202ENST00000566967 323 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AL162424.1-201ENST00000602325 221 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.63□□□□□ -2.31
VAT1Q99536 MIR8070-201ENST00000616510 88 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AL354950.2-201ENST00000617939 290 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 AC103705.1-201ENST00000619013 241 ntBASIC0.63□□□□□ -2.31
VAT1Q99536 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.63□□□□□ -2.31
VAT1Q99536 RNU6-199P-201ENST00000362954 107 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 SNORA80D-201ENST00000384488 135 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 MIR605-201ENST00000385078 83 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 RPS3AP1-201ENST00000413190 320 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.62□□□□□ -2.31
VAT1Q99536 MTCO3P18-201ENST00000440206 761 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms