Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MIR190B-201ENST00000401119 79 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 RNU6-370P-201ENST00000411008 104 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.58□□□□□ -2.16
RAB40CQ96S21 MTCYBP10-201ENST00000424905 650 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 RPL23AP50-201ENST00000434149 455 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.58□□□□□ -2.16
RAB40CQ96S21 AC010409.1-201ENST00000487382 476 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 AC093303.1-201ENST00000514549 295 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 RNU6-1213P-201ENST00000517075 94 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 IGKV3-31-201ENST00000523109 329 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 AL121579.1-201ENST00000555129 305 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 AL355073.2-201ENST00000612106 557 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 AL359757.2-201ENST00000624309 274 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 snoZ196.1-201ENST00000625269 89 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 AL669831.3-213ENST00000636676 183 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RAB40CQ96S21 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.58□□□□□ -2.16
RAB40CQ96S21 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
RAB40CQ96S21 MTND5P16-201ENST00000460269 1703 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RAB40CQ96S21 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.57□□□□□ -2.16
RAB40CQ96S21 U8.2-201ENST00000363156 134 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 SNORA67.3-201ENST00000384366 140 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RAB40CQ96S21 AC007098.1-201ENST00000420122 367 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 DPH3P2-201ENST00000422618 250 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 HMGN2P23-201ENST00000456759 269 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 RNU7-87P-201ENST00000459343 62 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 SNORA31.17-201ENST00000516953 127 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 MIR1273D-201ENST00000577266 86 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 AC024614.2-201ENST00000577584 372 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.57□□□□□ -2.16
RAB40CQ96S21 MIR5089-201ENST00000580047 84 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 AC005730.3-201ENST00000583067 366 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 RBM11P1-201ENST00000604951 799 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 AC010999.1-201ENST00000611856 324 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 AC126177.8-201ENST00000618339 1015 ntBASIC1.57□□□□□ -2.16
RAB40CQ96S21 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RAB40CQ96S21 snoU2-30.2-201ENST00000362805 70 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 RNU6-112P-201ENST00000363599 104 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 MIR548B-201ENST00000385247 97 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 AL117342.1-201ENST00000404861 406 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 SNORA3.2-201ENST00000408221 125 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 AL139156.1-201ENST00000412785 841 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.56□□□□□ -2.16
RAB40CQ96S21 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RAB40CQ96S21 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.56□□□□□ -2.16
RAB40CQ96S21 AC096638.1-201ENST00000444678 216 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 NDUFB4P10-201ENST00000452541 359 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 RN7SL429P-201ENST00000479090 223 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 RN7SL489P-201ENST00000486185 223 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 RN7SL327P-201ENST00000488659 223 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.56□□□□□ -2.16
RAB40CQ96S21 RNU6-1146P-201ENST00000516282 102 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.56□□□□□ -2.16
RAB40CQ96S21 AC091544.4-201ENST00000555268 342 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.56□□□□□ -2.16
RAB40CQ96S21 AC004584.2-201ENST00000570407 410 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 MZT1P2-201ENST00000604387 248 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 AC012493.3-201ENST00000604494 112 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.56□□□□□ -2.16
RAB40CQ96S21 MIR8074-201ENST00000615081 81 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 RN7SL853P-201ENST00000617250 223 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 AC092794.2-201ENST00000620933 563 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.56□□□□□ -2.16
RAB40CQ96S21 MIR338-201ENST00000636369 67 ntBASIC1.56□□□□□ -2.16
RAB40CQ96S21 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RAB40CQ96S21 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RAB40CQ96S21 RNU6-874P-201ENST00000362390 105 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 U3.8-201ENST00000363675 217 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 Y_RNA.364-201ENST00000365532 101 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 RNU6-281P-201ENST00000384212 103 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 MIR1253-201ENST00000408273 105 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 AC008134.1-201ENST00000420943 193 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 CST2P1-201ENST00000425770 87 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 AC092423.1-201ENST00000430165 186 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 HMGN2P34-201ENST00000437647 269 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.55□□□□□ -2.16
RAB40CQ96S21 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.55□□□□□ -2.16
RAB40CQ96S21 RNU6-221P-201ENST00000459541 99 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 RPL17P19-201ENST00000489069 552 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.55□□□□□ -2.16
RAB40CQ96S21 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.55□□□□□ -2.16
RAB40CQ96S21 AC025465.3-201ENST00000510570 311 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.55□□□□□ -2.16
RAB40CQ96S21 Y_RNA.683-201ENST00000516508 93 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 AC093023.1-201ENST00000547375 507 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.55□□□□□ -2.16
RAB40CQ96S21 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.55□□□□□ -2.16
RAB40CQ96S21 AC090617.3-201ENST00000573670 475 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 MIR3122-201ENST00000577243 73 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 MIR4298-201ENST00000584380 73 ntBASIC1.55□□□□□ -2.16
RAB40CQ96S21 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms