Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 NDUFB4P4-201ENST00000404822 243 ntBASIC2.09□□□□□ -2.07
NR1H4Q96RI1 SUMO2P12-201ENST00000405924 140 ntBASIC2.09□□□□□ -2.07
NR1H4Q96RI1 AC008134.1-201ENST00000420943 193 ntBASIC2.09□□□□□ -2.07
NR1H4Q96RI1 MTND4P28-201ENST00000426217 387 ntBASIC2.09□□□□□ -2.07
NR1H4Q96RI1 AC107083.1-201ENST00000439643 279 ntBASIC2.09□□□□□ -2.07
NR1H4Q96RI1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.09□□□□□ -2.07
NR1H4Q96RI1 RNU6-1146P-201ENST00000516282 102 ntBASIC2.09□□□□□ -2.07
NR1H4Q96RI1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.09□□□□□ -2.07
NR1H4Q96RI1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.07
NR1H4Q96RI1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
NR1H4Q96RI1 RNA5SP276-201ENST00000362580 94 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 RNA5SP213-201ENST00000391031 106 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 MIR1253-201ENST00000408273 105 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 Y_RNA.592-201ENST00000410274 109 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 RNA5SP504-201ENST00000410676 117 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 RPS15AP28-201ENST00000435088 386 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 AL353689.1-201ENST00000438895 199 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 RNU7-169P-201ENST00000459456 61 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 RN7SL274P-201ENST00000492268 272 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 Y_RNA.661-201ENST00000516003 99 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 RNU6-976P-201ENST00000516086 111 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 AC012493.3-201ENST00000604494 112 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 MIR7106-201ENST00000612419 65 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 AC104985.2-201ENST00000620598 500 ntBASIC2.08□□□□□ -2.08
NR1H4Q96RI1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
NR1H4Q96RI1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.07□□□□□ -2.08
NR1H4Q96RI1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NR1H4Q96RI1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NR1H4Q96RI1 RNU6-1266P-201ENST00000362794 105 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 MIR329-1-201ENST00000385028 80 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 MIR548B-201ENST00000385247 97 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 RNA5SP501-201ENST00000410990 112 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 AL158823.1-201ENST00000418441 478 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 AF228730.4-201ENST00000421457 183 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 MRPS18CP6-201ENST00000423587 223 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 AC096920.1-201ENST00000423991 241 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.07□□□□□ -2.08
NR1H4Q96RI1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.07□□□□□ -2.08
NR1H4Q96RI1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 RNA5SP57-201ENST00000459463 123 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 AC026436.1-201ENST00000510537 270 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 RN7SKP49-201ENST00000516675 260 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.07□□□□□ -2.08
NR1H4Q96RI1 AP002770.2-201ENST00000543613 532 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 AL133255.1-201ENST00000606374 441 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 AC087588.2-201ENST00000617667 426 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 SDR42E1P4-201ENST00000620894 481 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 AC006001.4-201ENST00000622243 395 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.07□□□□□ -2.08
NR1H4Q96RI1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.07□□□□□ -2.08
NR1H4Q96RI1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.06□□□□□ -2.08
NR1H4Q96RI1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
NR1H4Q96RI1 RNA5SP361-201ENST00000362686 118 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 RNU6-1145P-201ENST00000384246 107 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 Y_RNA.463-201ENST00000384271 102 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 Y_RNA.579-201ENST00000390939 94 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 AL359511.1-201ENST00000402970 211 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NR1H4Q96RI1 AC063976.3-201ENST00000426849 329 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 PCNPP5-201ENST00000452246 481 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 U8.22-201ENST00000459141 133 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 RNU6-221P-201ENST00000459541 99 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 AC011406.1-201ENST00000512440 370 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 RNA5SP320-201ENST00000516263 124 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 LARP7P3-201ENST00000579888 337 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 AL096840.1-201ENST00000603287 93 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 AC005034.5-201ENST00000604219 466 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 U2.1-201ENST00000618978 145 ntBASIC2.06□□□□□ -2.08
NR1H4Q96RI1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NR1H4Q96RI1 RNU6-1301P-201ENST00000362724 104 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 SNORA48.1-201ENST00000390879 135 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 AC060773.1-201ENST00000421698 310 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 TOMM22P2-201ENST00000430735 237 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 AC007677.1-201ENST00000445757 515 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 RPL23AP6-201ENST00000446637 472 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.05□□□□□ -2.08
NR1H4Q96RI1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.05□□□□□ -2.08
NR1H4Q96RI1 AC027575.1-201ENST00000481064 460 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 YWHAEP4-201ENST00000505390 198 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 AC074133.1-201ENST00000515696 183 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 RNU6-911P-201ENST00000516523 104 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.05□□□□□ -2.08
NR1H4Q96RI1 MIR4319-201ENST00000577285 85 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 MIR5007-201ENST00000583098 95 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 AL138825.1-201ENST00000618587 192 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 AC009831.4-201ENST00000620744 325 ntBASIC2.05□□□□□ -2.08
NR1H4Q96RI1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NR1H4Q96RI1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NR1H4Q96RI1 RNU6-1115P-201ENST00000362490 106 ntBASIC2.04□□□□□ -2.08
NR1H4Q96RI1 Y_RNA.39-201ENST00000362620 98 ntBASIC2.04□□□□□ -2.08
NR1H4Q96RI1 RNU4-42P-201ENST00000364738 142 ntBASIC2.04□□□□□ -2.08
NR1H4Q96RI1 RNU6-1240P-201ENST00000365155 104 ntBASIC2.04□□□□□ -2.08
NR1H4Q96RI1 Y_RNA.460-201ENST00000384255 102 ntBASIC2.04□□□□□ -2.08
NR1H4Q96RI1 RNA5SP212-201ENST00000391223 107 ntBASIC2.04□□□□□ -2.08
NR1H4Q96RI1 MIR1185-2-201ENST00000408687 86 ntBASIC2.04□□□□□ -2.08
NR1H4Q96RI1 SNORD12B-201ENST00000410433 91 ntBASIC2.04□□□□□ -2.08
NR1H4Q96RI1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.04□□□□□ -2.08
NR1H4Q96RI1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 236.9 ms