Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MIR515-1-201ENST00000384884 83 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 MIR32-201ENST00000384965 70 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 RNU6-332P-201ENST00000391193 108 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 RNA5SP504-201ENST00000410676 117 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS35Q96QK1 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 DLGAP5P1-201ENST00000430307 464 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS35Q96QK1 MTCO2P7-201ENST00000446518 666 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS35Q96QK1 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 MTND1P5-201ENST00000517906 940 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 AC109635.3-201ENST00000529536 185 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 AC008269.2-201ENST00000561915 1105 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS35Q96QK1 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 SNORD11B-201ENST00000607707 90 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 snoZ196.1-201ENST00000625269 89 ntBASIC1.36□□□□□ -2.19
VPS35Q96QK1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS35Q96QK1 Y_RNA.100-201ENST00000363141 102 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 SNORA4.2-201ENST00000365313 147 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 Y_RNA.414-201ENST00000384011 101 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 RNU6-203P-201ENST00000384038 104 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 MIR1253-201ENST00000408273 105 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 AC016909.1-201ENST00000415916 166 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS35Q96QK1 AL603825.1-201ENST00000438481 80 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 MTATP6P26-201ENST00000445926 662 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS35Q96QK1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS35Q96QK1 ACA59.1-201ENST00000515966 143 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 RNU1-92P-201ENST00000517017 135 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS35Q96QK1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.35□□□□□ -2.19
VPS35Q96QK1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.35□□□□□ -2.19
VPS35Q96QK1 MIR3672-201ENST00000584290 82 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 AC097065.2-201ENST00000608159 533 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 AC015540.1-201ENST00000615828 501 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 AC006504.8-201ENST00000621046 635 ntBASIC1.35□□□□□ -2.19
VPS35Q96QK1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
VPS35Q96QK1 Y_RNA.212-201ENST00000364177 102 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 RNU6-534P-201ENST00000364877 106 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
VPS35Q96QK1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS35Q96QK1 COX6CP10-201ENST00000416832 224 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 RPS27P16-201ENST00000425758 201 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 AC027119.1-201ENST00000440877 241 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 AC009474.2-201ENST00000451383 136 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 MTCYBP18-201ENST00000501056 747 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS35Q96QK1 AC079140.2-201ENST00000506193 142 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 AC019176.1-201ENST00000518519 225 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS35Q96QK1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.34□□□□□ -2.19
VPS35Q96QK1 AC015688.6-201ENST00000577737 104 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 AC024614.3-201ENST00000637860 256 ntBASIC1.34□□□□□ -2.19
VPS35Q96QK1 Y_RNA.319-201ENST00000365138 92 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 Y_RNA.402-201ENST00000383972 102 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 MIR181A1-201ENST00000385026 110 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 MIR153-2-201ENST00000385225 87 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 MRPL35P1-201ENST00000404272 572 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 AC008134.1-201ENST00000420943 193 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS35Q96QK1 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 RNU6-58P-201ENST00000517143 103 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 AC025647.1-201ENST00000517879 253 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 AC024995.1-201ENST00000523014 93 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 SUB1P3-201ENST00000564581 315 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS35Q96QK1 MIR4709-201ENST00000577272 72 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 AP003465.2-201ENST00000602571 373 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 PRR13P7-201ENST00000605538 430 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 AC124303.1-201ENST00000605703 360 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 AC080013.6-201ENST00000606185 215 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 AC019193.3-201ENST00000609144 554 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.33□□□□□ -2.2
VPS35Q96QK1 SNORD33-201ENST00000362761 85 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 SNORA7.1-201ENST00000363750 139 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 Y_RNA.436-201ENST00000384097 102 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 MIR194-1-201ENST00000384892 85 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 RNA5SP323-201ENST00000391094 133 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 AC016907.1-201ENST00000419483 435 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS35Q96QK1 RNU1-123P-201ENST00000458950 160 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 RNU7-34P-201ENST00000459394 64 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 RNU6-221P-201ENST00000459541 99 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 SNORA25.14-201ENST00000516481 132 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 RNU6-1198P-201ENST00000516904 67 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS35Q96QK1 AC027288.2-201ENST00000553028 243 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS35Q96QK1 MIR3937-201ENST00000580135 106 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS35Q96QK1 AC090617.10-201ENST00000624308 134 ntBASIC1.32□□□□□ -2.2
VPS35Q96QK1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms