Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC124303.1-201ENST00000605703 360 ntBASIC1.52□□□□□ -2.17
ZNF560Q96MR9 AC097065.2-201ENST00000608159 533 ntBASIC1.52□□□□□ -2.17
ZNF560Q96MR9 AC009033.1-201ENST00000624279 431 ntBASIC1.52□□□□□ -2.17
ZNF560Q96MR9 AL078596.1-201ENST00000624856 447 ntBASIC1.52□□□□□ -2.17
ZNF560Q96MR9 AL161722.3-201ENST00000605789 2983 ntBASIC1.52□□□□□ -2.17
ZNF560Q96MR9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ZNF560Q96MR9 RNU6-271P-201ENST00000363858 105 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 MIR32-201ENST00000384965 70 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 MIR153-2-201ENST00000385225 87 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 FGF7P8-201ENST00000402994 292 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 Y_RNA.595-201ENST00000410403 105 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.51□□□□□ -2.17
ZNF560Q96MR9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.51□□□□□ -2.17
ZNF560Q96MR9 Z82205.1-201ENST00000428456 297 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 HMGN2P34-201ENST00000437647 269 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 RNU6-58P-201ENST00000517143 103 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.51□□□□□ -2.17
ZNF560Q96MR9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.51□□□□□ -2.17
ZNF560Q96MR9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.51□□□□□ -2.17
ZNF560Q96MR9 SUB1P3-201ENST00000564581 315 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 TPRKBP2-201ENST00000565969 475 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.51□□□□□ -2.17
ZNF560Q96MR9 MIR4421-201ENST00000578133 69 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 snoZ196.1-201ENST00000625269 89 ntBASIC1.51□□□□□ -2.17
ZNF560Q96MR9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
ZNF560Q96MR9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
ZNF560Q96MR9 MIR302D-201ENST00000362275 68 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 RNU1-62P-201ENST00000362599 164 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 MIR548B-201ENST00000385247 97 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.5□□□□□ -2.17
ZNF560Q96MR9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ZNF560Q96MR9 RNA5SP118-201ENST00000410385 109 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 AL161935.2-201ENST00000414627 60 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.5□□□□□ -2.17
ZNF560Q96MR9 Z82188.1-201ENST00000436709 154 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.5□□□□□ -2.17
ZNF560Q96MR9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.5□□□□□ -2.17
ZNF560Q96MR9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.5□□□□□ -2.17
ZNF560Q96MR9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.5□□□□□ -2.17
ZNF560Q96MR9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.5□□□□□ -2.17
ZNF560Q96MR9 MIR5696-201ENST00000578474 85 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.5□□□□□ -2.17
ZNF560Q96MR9 AC016727.1-205ENST00000605437 569 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 SNORD11B-201ENST00000607707 90 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 AC100821.1-201ENST00000523153 2479 ntBASIC1.5□□□□□ -2.17
ZNF560Q96MR9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
ZNF560Q96MR9 Y_RNA.319-201ENST00000365138 92 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 Y_RNA.450-201ENST00000384198 113 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 Y_RNA.554-201ENST00000384672 102 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 Y_RNA.573-201ENST00000384763 105 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 RNU6-57P-201ENST00000411348 103 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.49□□□□□ -2.17
ZNF560Q96MR9 NDUFB4P10-201ENST00000452541 359 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 snoU13.27-201ENST00000459278 104 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 RNU6-221P-201ENST00000459541 99 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 AL163540.1-201ENST00000485382 386 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 AC108729.3-201ENST00000513484 108 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 RNA5SP445-201ENST00000515889 115 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 AC024995.1-201ENST00000523014 93 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.49□□□□□ -2.17
ZNF560Q96MR9 MIR4498-201ENST00000577599 66 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 U4.5-201ENST00000617137 123 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 AC006001.4-201ENST00000622243 395 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 AC090617.10-201ENST00000624308 134 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 ICE2P2-201ENST00000483823 2787 ntBASIC1.49□□□□□ -2.17
ZNF560Q96MR9 SNORD33-201ENST00000362761 85 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 Y_RNA.89-201ENST00000363031 102 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 Y_RNA.287-201ENST00000364853 94 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 SNORD1A-201ENST00000364968 72 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 RNU6-596P-201ENST00000365395 98 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 MIR1253-201ENST00000408273 105 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 RNA5SP504-201ENST00000410676 117 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.48□□□□□ -2.17
ZNF560Q96MR9 AC009161.1-201ENST00000417306 376 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 AC008134.1-201ENST00000420943 193 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.48□□□□□ -2.17
ZNF560Q96MR9 AC073910.1-201ENST00000445047 438 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.48□□□□□ -2.17
ZNF560Q96MR9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.48□□□□□ -2.17
ZNF560Q96MR9 RPS26P55-201ENST00000471178 356 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 RNU6-864P-201ENST00000516256 108 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 RNU6-902P-201ENST00000517212 91 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 AC025647.1-201ENST00000517879 253 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 AC027288.2-201ENST00000553028 243 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 7SK.7-201ENST00000603504 247 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 AC012557.2-201ENST00000605919 418 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
ZNF560Q96MR9 AC095038.3-201ENST00000634439 195 ntBASIC1.48□□□□□ -2.17
ZNF560Q96MR9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.48□□□□□ -2.17
ZNF560Q96MR9 RNU6-534P-201ENST00000364877 106 ntBASIC1.47□□□□□ -2.17
ZNF560Q96MR9 RNU6-203P-201ENST00000384038 104 ntBASIC1.47□□□□□ -2.17
ZNF560Q96MR9 RNU6-17P-201ENST00000384245 107 ntBASIC1.47□□□□□ -2.17
ZNF560Q96MR9 RNU6-18P-201ENST00000384527 107 ntBASIC1.47□□□□□ -2.17
ZNF560Q96MR9 RNU6-417P-201ENST00000384712 107 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms