Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AL359851.1-201ENST00000569460 4997 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 RNU5B-2P-201ENST00000363036 113 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 RNU6-1252P-201ENST00000363054 104 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 RNU6-280P-201ENST00000364145 104 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 SNORA25B-201ENST00000365507 128 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 RPL37P10-201ENST00000412884 288 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 AC138393.2-201ENST00000414742 246 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 RPL30P16-201ENST00000419341 429 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 ATP5J2P3-201ENST00000451550 258 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 HMGN1P12-201ENST00000499125 195 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 RNU6-273P-201ENST00000516937 96 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 MIR6128-201ENST00000615528 109 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
COL27A1Q8IZC6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 CASC19-280ENST00000642102 1351 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 RNU6-545P-201ENST00000362681 104 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 Y_RNA.279-201ENST00000364763 95 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 MIR521-1-201ENST00000384902 87 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 RPL21P111-201ENST00000418453 477 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AC079354.2-201ENST00000453523 154 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AC007215.1-201ENST00000464893 276 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AC107032.1-201ENST00000485945 480 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 RPL17P19-201ENST00000489069 552 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AL590705.4-201ENST00000532209 134 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AC018462.2-201ENST00000605375 395 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 MIR3976-201ENST00000606807 139 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 MIR6078-201ENST00000611069 100 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 SNORA43.4-201ENST00000629559 138 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 TPTEP1-208ENST00000636884 213 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AC100810.6-201ENST00000638068 285 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 MTND5P10-201ENST00000603719 1809 ntBASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
COL27A1Q8IZC6 AC008555.8-201ENST00000623602 2168 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 Y_RNA.123-201ENST00000363338 102 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 U3.9-201ENST00000363823 204 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 SNORD115-32-201ENST00000364079 82 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 RNU6-601P-201ENST00000384540 107 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 RNA5SP465-201ENST00000391195 109 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 RNU6-1156P-201ENST00000410365 100 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 RNU6-1148P-201ENST00000410992 104 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 USP9YP28-201ENST00000435142 589 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AC098614.3-201ENST00000438957 440 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 PRDX4P1-201ENST00000507189 574 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 MIR514B-201ENST00000516774 80 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AC022202.1-201ENST00000613515 211 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AC104260.1-201ENST00000616660 539 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 MIR6515-201ENST00000619843 57 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 U1.36-201ENST00000620684 176 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AL359697.1-201ENST00000624879 587 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AL159152.1-201ENST00000635019 2587 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 ZNF299P-201ENST00000406845 1804 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 Y_RNA.72-201ENST00000362894 103 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 Y_RNA.88-201ENST00000363029 99 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 Y_RNA.112-201ENST00000363250 102 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 Y_RNA.390-201ENST00000383932 102 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 RNU6-17P-201ENST00000384245 107 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 RNU6-18P-201ENST00000384527 107 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 Y_RNA.533-201ENST00000384596 114 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AL356776.1-201ENST00000406574 447 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 IPO7P1-201ENST00000442031 636 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AC107399.1-201ENST00000451226 265 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 MIR4801-201ENST00000582704 82 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AC005730.3-201ENST00000583067 366 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 AC025253.1-201ENST00000613623 543 ntBASIC1.18□□□□□ -2.22
COL27A1Q8IZC6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 RNA5SP494-201ENST00000410653 129 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 AC007098.1-201ENST00000420122 367 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 EIF4EP2-201ENST00000422816 654 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 RPS3AP52-201ENST00000435639 297 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 NDUFB4P10-201ENST00000452541 359 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 AC114982.1-201ENST00000469402 321 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 AC018868.1-201ENST00000491307 315 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 AC103851.1-201ENST00000506833 274 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 RNA5SP220-201ENST00000516298 104 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 RNU6-307P-201ENST00000516743 106 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 RNU6-1098P-201ENST00000516772 96 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 MIR4273-201ENST00000582824 84 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 AC060780.3-201ENST00000589464 80 ntBASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.17□□□□□ -2.22
COL27A1Q8IZC6 BX322639.1-202ENST00000423987 2213 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms