Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.39□□□□□ -2.03
HERC6Q8IVU3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HERC6Q8IVU3 RNU6-490P-201ENST00000362985 107 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 SNORD115-3-201ENST00000363100 82 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.106-201ENST00000363189 100 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.496-201ENST00000384444 101 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 RNU6-160P-201ENST00000384591 107 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 WARS2P1-201ENST00000429678 537 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.39□□□□□ -2.03
HERC6Q8IVU3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.39□□□□□ -2.03
HERC6Q8IVU3 RNU6-699P-201ENST00000517081 110 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 MIR2355-201ENST00000517199 87 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 AC144568.1-201ENST00000520139 137 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.39□□□□□ -2.03
HERC6Q8IVU3 AC233702.2-202ENST00000562547 291 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 SNORD11B-201ENST00000607707 90 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.39□□□□□ -2.03
HERC6Q8IVU3 AC005296.1-201ENST00000616145 209 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 MIR6766-201ENST00000622641 72 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.39□□□□□ -2.03
HERC6Q8IVU3 AC080100.1-201ENST00000624239 5356 ntBASIC2.39□□□□□ -2.03
HERC6Q8IVU3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.39□□□□□ -2.03
HERC6Q8IVU3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 MIR21-201ENST00000362134 72 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.112-201ENST00000363250 102 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 RNU6-99P-201ENST00000364721 107 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.326-201ENST00000365176 113 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 RNU1-139P-201ENST00000391307 165 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 MIR548P-201ENST00000408336 84 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 AC018865.2-201ENST00000423631 129 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.631-201ENST00000459607 101 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 MTND5P16-201ENST00000460269 1703 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 AP000870.1-201ENST00000472927 406 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 ATP5EP1-201ENST00000510257 156 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 AP003072.1-201ENST00000531740 145 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 RRN3P3-201ENST00000549207 578 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 AC022432.1-201ENST00000595739 310 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.38□□□□□ -2.03
HERC6Q8IVU3 AC022202.1-201ENST00000613515 211 ntBASIC2.38□□□□□ -2.03
HERC6Q8IVU3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.37□□□□□ -2.03
HERC6Q8IVU3 RNU6-873P-201ENST00000363833 107 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 MIR487A-201ENST00000385009 80 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 RNA5SP213-201ENST00000391031 106 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 HMGN2P39-201ENST00000398005 273 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 MIR1262-201ENST00000408276 93 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 MIR1283-1-201ENST00000408494 87 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 RNU6-1156P-201ENST00000410365 100 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 MRPS18CP6-201ENST00000423587 223 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.37□□□□□ -2.03
HERC6Q8IVU3 AC099799.1-201ENST00000439809 192 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 AC016925.1-201ENST00000458303 298 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.37□□□□□ -2.03
HERC6Q8IVU3 AL163540.1-201ENST00000485382 386 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 RNA5SP200-201ENST00000516360 103 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 SCARNA15.1-201ENST00000516384 125 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 RNU7-193P-201ENST00000516723 65 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.711-201ENST00000516993 102 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 CYCSP23-201ENST00000519781 313 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 MIR5695-201ENST00000579717 85 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 MIR6132-201ENST00000622083 109 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 AC091925.1-201ENST00000623204 462 ntBASIC2.37□□□□□ -2.03
HERC6Q8IVU3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HERC6Q8IVU3 RNU6-545P-201ENST00000362681 104 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.445-201ENST00000384168 102 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 RNU6-793P-201ENST00000384233 104 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 MIR549A-201ENST00000385268 96 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
HERC6Q8IVU3 SNORD23.1-201ENST00000408212 104 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 AC114482.1-201ENST00000418010 247 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.36□□□□□ -2.03
HERC6Q8IVU3 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 RNU6-948P-201ENST00000516374 107 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 RNU2-34P-201ENST00000516534 121 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 DEFB131C-201ENST00000528817 165 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 MYL12BP1-201ENST00000569826 507 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 AC010999.1-201ENST00000611856 324 ntBASIC2.36□□□□□ -2.03
HERC6Q8IVU3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.36□□□□□ -2.03
HERC6Q8IVU3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.36□□□□□ -2.03
HERC6Q8IVU3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HERC6Q8IVU3 RNU1-17P-201ENST00000363022 152 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.252-201ENST00000364556 101 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 SNORA22B-201ENST00000383876 138 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 MIR144-201ENST00000384886 86 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 MIR586-201ENST00000385035 97 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 SNORA69.1-201ENST00000390904 137 ntBASIC2.35□□□□□ -2.03
HERC6Q8IVU3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 276.3 ms