Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU6-439P-201ENST00000384188 106 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 Y_RNA.451-201ENST00000384200 100 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 RNU6-17P-201ENST00000384245 107 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 RNU6-18P-201ENST00000384527 107 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 Y_RNA.524-201ENST00000384564 100 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 Y_RNA.561-201ENST00000384694 100 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 MIR548F5-201ENST00000408421 86 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.87□□□□□ -2.11
PRPF39Q86UA1 AC074085.1-201ENST00000413598 418 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.87□□□□□ -2.11
PRPF39Q86UA1 MTCO3P29-201ENST00000432119 779 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 RPS3AP52-201ENST00000435639 297 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 AC107399.1-201ENST00000451226 265 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 RPS29P11-201ENST00000496507 171 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 AC107393.1-201ENST00000512403 346 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 Y_RNA.706-201ENST00000516933 99 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.87□□□□□ -2.11
PRPF39Q86UA1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.87□□□□□ -2.11
PRPF39Q86UA1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.87□□□□□ -2.11
PRPF39Q86UA1 AC008873.1-201ENST00000625051 138 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 snoZ196.1-201ENST00000625269 89 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PRPF39Q86UA1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.86□□□□□ -2.11
PRPF39Q86UA1 Y_RNA.2-201ENST00000362330 96 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 RNU1-62P-201ENST00000362599 164 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 RNU6-727P-201ENST00000363592 107 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PRPF39Q86UA1 Y_RNA.490-201ENST00000384413 102 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PRPF39Q86UA1 CST2P1-201ENST00000425770 87 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 HSPE1P21-201ENST00000438283 308 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PRPF39Q86UA1 AC025465.3-201ENST00000510570 311 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 UBL5P4-201ENST00000562584 236 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.86□□□□□ -2.11
PRPF39Q86UA1 MIR3198-2-201ENST00000577868 80 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 AC092794.1-201ENST00000612734 582 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 MIR8074-201ENST00000615081 81 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 AL133216.2-202ENST00000634512 349 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 AC068205.3-201ENST00000636385 468 ntBASIC1.86□□□□□ -2.11
PRPF39Q86UA1 RNU6-595P-201ENST00000363944 107 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 SNORD48-201ENST00000364953 64 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 RNU6-159P-201ENST00000391080 106 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PRPF39Q86UA1 AC008134.1-201ENST00000420943 193 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 AC069257.2-201ENST00000441819 155 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 SNORD5.1-201ENST00000458800 75 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 SNORA25.15-201ENST00000516487 89 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 AC084364.2-201ENST00000546924 395 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.85□□□□□ -2.11
PRPF39Q86UA1 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 MIR5695-201ENST00000579717 85 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 AC100812.1-201ENST00000607622 580 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 AL353149.1-201ENST00000610667 244 ntBASIC1.85□□□□□ -2.11
PRPF39Q86UA1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.85□□□□□ -2.11
PRPF39Q86UA1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.85□□□□□ -2.11
PRPF39Q86UA1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PRPF39Q86UA1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 RNU6-593P-201ENST00000364716 112 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 SNORD87-201ENST00000364849 89 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 RNU6-793P-201ENST00000384233 104 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 RNU6-842P-201ENST00000384269 107 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 RNA5SP213-201ENST00000391031 106 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.84□□□□□ -2.11
PRPF39Q86UA1 AL603825.1-201ENST00000438481 80 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 AP000870.1-201ENST00000472927 406 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 AC082651.2-201ENST00000496833 166 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 CBX3P8-201ENST00000532412 525 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 AC104581.2-201ENST00000572227 430 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 AC024614.2-201ENST00000577584 372 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 AC018462.2-201ENST00000605375 395 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 AC084768.2-201ENST00000622736 221 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 MIR338-201ENST00000636369 67 ntBASIC1.84□□□□□ -2.11
PRPF39Q86UA1 MTND4P12-201ENST00000498999 1377 ntBASIC1.84□□□□□ -2.12
PRPF39Q86UA1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PRPF39Q86UA1 MIR424-201ENST00000362227 98 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.179-201ENST00000363844 90 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 SNORA67.2-201ENST00000384300 149 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 Y_RNA.473-201ENST00000384333 102 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 RNU6-601P-201ENST00000384540 107 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 RNU6-296P-201ENST00000384608 107 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 RNU6-417P-201ENST00000384712 107 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 RNA5SP323-201ENST00000391094 133 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PRPF39Q86UA1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 MIR548K-201ENST00000408406 116 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 MIR1267-201ENST00000408723 78 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 RPL37P10-201ENST00000412884 288 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 HSPE1P9-201ENST00000440046 311 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 AL355802.3-201ENST00000607571 545 ntBASIC1.83□□□□□ -2.12
PRPF39Q86UA1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms