Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 SERF1AP1-201ENST00000514575 187 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 AC018630.3-201ENST00000542637 96 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX53Q86TM3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX53Q86TM3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX53Q86TM3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX53Q86TM3 AC078938.1-201ENST00000620993 318 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 AC008873.1-201ENST00000625051 138 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
DDX53Q86TM3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 MIR410-201ENST00000362222 80 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 Y_RNA.54-201ENST00000362766 105 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 Y_RNA.416-201ENST00000384014 113 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 AL603910.2-201ENST00000407268 136 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 RNU2-32P-201ENST00000411193 191 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 RPL19P1-201ENST00000411635 428 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 OOSP1P1-201ENST00000423265 274 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 CYP2C59P-201ENST00000457790 269 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 ATP5EP1-201ENST00000510257 156 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 RNU2-31P-201ENST00000516954 155 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 RNU6-794P-201ENST00000517261 64 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 AC079600.2-201ENST00000550076 130 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 MIR3117-201ENST00000584034 78 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 AL356280.1-201ENST00000603614 379 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 AL590240.4-201ENST00000616908 390 ntBASIC3.07□□□□□ -1.92
DDX53Q86TM3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
DDX53Q86TM3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.06□□□□□ -1.92
DDX53Q86TM3 RNU1-23P-201ENST00000363361 144 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 RNU6-454P-201ENST00000364292 107 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 SNORA51.4-201ENST00000364993 124 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 Y_RNA.352-201ENST00000365439 102 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 Y_RNA.383-201ENST00000383855 97 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 RNU6-546P-201ENST00000383991 107 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 Y_RNA.478-201ENST00000384358 107 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 RNU6-1026P-201ENST00000384465 108 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 MIR586-201ENST00000385035 97 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 MIR548B-201ENST00000385247 97 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 RPL21P3-201ENST00000395517 478 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 RNU6-847P-201ENST00000411115 108 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.06□□□□□ -1.92
DDX53Q86TM3 POLR2KP2-201ENST00000438155 177 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.06□□□□□ -1.92
DDX53Q86TM3 MRPS10P1-201ENST00000448483 130 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 HMGN2P9-201ENST00000476875 229 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 RNU6-155P-201ENST00000516347 100 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 AC109329.2-201ENST00000519658 482 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.06□□□□□ -1.92
DDX53Q86TM3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
DDX53Q86TM3 MIR3668-201ENST00000582138 75 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 AC090616.3-201ENST00000582184 217 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 AC037487.3-201ENST00000606668 112 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
DDX53Q86TM3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.06□□□□□ -1.92
DDX53Q86TM3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
DDX53Q86TM3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
DDX53Q86TM3 AC008264.2-201ENST00000610193 3731 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 AC092593.1-201ENST00000515413 1815 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 AC138915.1-201ENST00000565427 1685 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
DDX53Q86TM3 RNU6-1266P-201ENST00000362794 105 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 U3.8-201ENST00000363675 217 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 RNU6-326P-201ENST00000365480 107 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 MIR95-201ENST00000385072 81 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 MIR1283-1-201ENST00000408494 87 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 RNU2-54P-201ENST00000410299 190 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 RNU2-63P-201ENST00000410792 194 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 RNU6-1199P-201ENST00000411249 104 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.05□□□□□ -1.92
DDX53Q86TM3 SNORD109B-201ENST00000458961 67 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 SNORD109A-201ENST00000459128 67 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.05□□□□□ -1.92
DDX53Q86TM3 MIR1248-201ENST00000629190 106 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.05□□□□□ -1.92
DDX53Q86TM3 Z82209.1-201ENST00000422141 2135 ntBASIC3.05□□□□□ -1.92
DDX53Q86TM3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.05□□□□□ -1.92
DDX53Q86TM3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.04□□□□□ -1.92
DDX53Q86TM3 AL355596.1-201ENST00000565399 3996 ntBASIC3.04□□□□□ -1.92
DDX53Q86TM3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
DDX53Q86TM3 RNU4-82P-201ENST00000362443 140 ntBASIC3.04□□□□□ -1.92
DDX53Q86TM3 Y_RNA.277-201ENST00000364754 102 ntBASIC3.04□□□□□ -1.92
DDX53Q86TM3 RNA5SP240-201ENST00000365355 128 ntBASIC3.04□□□□□ -1.92
DDX53Q86TM3 Y_RNA.552-201ENST00000384665 112 ntBASIC3.04□□□□□ -1.92
DDX53Q86TM3 AC009963.1-201ENST00000417265 157 ntBASIC3.04□□□□□ -1.92
DDX53Q86TM3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX53Q86TM3 TOMM22P2-201ENST00000430735 237 ntBASIC3.04□□□□□ -1.92
DDX53Q86TM3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.04□□□□□ -1.92
DDX53Q86TM3 RNU6-111P-201ENST00000517179 105 ntBASIC3.04□□□□□ -1.92
DDX53Q86TM3 AL355297.2-201ENST00000604792 129 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms