Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRT28Q7Z3Y7 MIR378A-201ENST00000362177 66 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 RNU6-280P-201ENST00000364145 104 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 SNORA25.9-201ENST00000365087 128 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 Y_RNA.557-201ENST00000384680 107 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 MIR1294-201ENST00000408503 142 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 RNU6-321P-201ENST00000410912 106 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 BTF3P4-201ENST00000418852 495 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 RN7SKP40-201ENST00000517211 242 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 UBL5P4-201ENST00000562584 236 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 MIR5695-201ENST00000579717 85 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 SNRPGP19-201ENST00000603826 189 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 AC005296.1-201ENST00000616145 209 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 AL138825.1-201ENST00000618587 192 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 AL606534.2-204ENST00000635008 178 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 MIR4272-201ENST00000635924 64 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 FO624990.1-201ENST00000636373 85 ntBASIC2.72□□□□□ -1.97
KRT28Q7Z3Y7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 Y_RNA.80-201ENST00000362996 102 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 RNU6-879P-201ENST00000364328 108 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 Y_RNA.485-201ENST00000384395 102 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 RNU6-159P-201ENST00000391080 106 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 AC112492.4-201ENST00000456549 352 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 AC007215.1-201ENST00000464893 276 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 RNU6-1114P-201ENST00000516022 107 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 SNORA25.14-201ENST00000516481 132 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 RNU6-911P-201ENST00000516523 104 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 MIR5089-201ENST00000580047 84 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 MIR5002-201ENST00000584713 97 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 VN1R91P-201ENST00000594377 169 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 SNORD58B-201ENST00000607313 66 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.71□□□□□ -1.98
KRT28Q7Z3Y7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 RNU5F-3P-201ENST00000363767 117 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 RNU6-944P-201ENST00000364023 107 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 RNA5SP125-201ENST00000364843 120 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 AC117470.1-201ENST00000381974 330 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 Y_RNA.422-201ENST00000384054 114 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 Y_RNA.424-201ENST00000384063 103 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 RNU6-639P-201ENST00000384074 107 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 RNU1-139P-201ENST00000391307 165 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 MTCO3P19-201ENST00000415864 321 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 CBX3P6-201ENST00000430257 527 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 SNORD13-201ENST00000459299 104 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 snoU13.18-201ENST00000459483 104 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 MIR2355-201ENST00000517199 87 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 AC026470.2-201ENST00000561492 181 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 AL356575.1-201ENST00000603008 283 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 AC005562.2-201ENST00000618264 111 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 AC005592.1-201ENST00000566527 1640 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 MTND4P1-201ENST00000457501 1466 ntBASIC2.7□□□□□ -1.98
KRT28Q7Z3Y7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 BX322639.1-202ENST00000423987 2213 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 RNA5SP190-201ENST00000365222 118 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 SNORA18.2-201ENST00000383865 132 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 RNU6-26P-201ENST00000383985 107 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 RNU6-546P-201ENST00000383991 107 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 MIR95-201ENST00000385072 81 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 MRPL42P3-201ENST00000401492 326 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 SUMO1P4-201ENST00000429430 302 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 AC003989.2-201ENST00000440224 169 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 U8.22-201ENST00000459141 133 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 MIR449C-201ENST00000516047 92 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 RNU6-965P-201ENST00000516721 96 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 MIR5006-201ENST00000583027 110 ntBASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
KRT28Q7Z3Y7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 AC091812.1-201ENST00000432235 1948 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 RNU6-873P-201ENST00000363833 107 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 SNORD32B-201ENST00000364460 84 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 MIR10B-201ENST00000385011 110 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 MIR561-201ENST00000385216 97 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 Y_RNA.645-201ENST00000391229 102 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 RNU2-32P-201ENST00000411193 191 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 AC004386.2-201ENST00000441858 148 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 AC107032.1-201ENST00000485945 480 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 RNU5F-4P-201ENST00000516581 114 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 RNU2-44P-201ENST00000516795 194 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 AC023824.2-201ENST00000566185 400 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 AC006504.6-201ENST00000590142 199 ntBASIC2.68□□□□□ -1.98
KRT28Q7Z3Y7 TCL6_2.1-201ENST00000615162 119 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms