Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MIR181A1-201ENST00000385026 110 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 RNU6-373P-201ENST00000411247 98 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.32□□□□□ -2.2
NIPAL3Q6P499 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.32□□□□□ -2.2
NIPAL3Q6P499 AL135790.2-201ENST00000437701 267 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 AC027119.1-201ENST00000440877 241 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 MTATP6P26-201ENST00000445926 662 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 RNU7-34P-201ENST00000459394 64 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 RNU6-221P-201ENST00000459541 99 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 RPS26P45-201ENST00000471748 340 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 HMGN1P12-201ENST00000499125 195 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 RNU6-58P-201ENST00000517143 103 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.32□□□□□ -2.2
NIPAL3Q6P499 MIR3672-201ENST00000584290 82 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 AL645939.4-201ENST00000604495 135 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
NIPAL3Q6P499 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.32□□□□□ -2.2
NIPAL3Q6P499 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
NIPAL3Q6P499 RNU6-457P-201ENST00000363999 107 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 Y_RNA.212-201ENST00000364177 102 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 RNU6-534P-201ENST00000364877 106 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 RNU6-1240P-201ENST00000365155 104 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 Y_RNA.402-201ENST00000383972 102 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 RNA5SP467-201ENST00000391274 118 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 RPS27P16-201ENST00000425758 201 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 DLGAP5P1-201ENST00000430307 464 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 MTCO2P7-201ENST00000446518 666 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.31□□□□□ -2.2
NIPAL3Q6P499 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 AC025647.1-201ENST00000517879 253 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 AC015688.6-201ENST00000577737 104 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.31□□□□□ -2.2
NIPAL3Q6P499 MIR4303-201ENST00000581299 66 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 AC009033.1-201ENST00000624279 431 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 AC024614.3-201ENST00000637860 256 ntBASIC1.31□□□□□ -2.2
NIPAL3Q6P499 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
NIPAL3Q6P499 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
NIPAL3Q6P499 Y_RNA.135-201ENST00000363439 95 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 SNORD116-11-201ENST00000383882 92 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 RNU6-1065P-201ENST00000384513 106 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 RNU6-174P-201ENST00000410406 106 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 RNU6-955P-201ENST00000410497 104 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 AC016909.1-201ENST00000415916 166 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 AL163195.1-201ENST00000496941 348 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 AC103851.1-201ENST00000506833 274 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 RNU1-142P-201ENST00000516682 145 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.3□□□□□ -2.2
NIPAL3Q6P499 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.3□□□□□ -2.2
NIPAL3Q6P499 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.3□□□□□ -2.2
NIPAL3Q6P499 AP003465.2-201ENST00000602571 373 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 PRR13P7-201ENST00000605538 430 ntBASIC1.3□□□□□ -2.2
NIPAL3Q6P499 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.3□□□□□ -2.2
NIPAL3Q6P499 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
NIPAL3Q6P499 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
NIPAL3Q6P499 Y_RNA.9-201ENST00000362354 101 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 RNU1-62P-201ENST00000362599 164 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 RNU6-137P-201ENST00000363680 108 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 RNU5F-3P-201ENST00000363767 117 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 RNU6-873P-201ENST00000363833 107 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 Y_RNA.436-201ENST00000384097 102 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 RNU6-950P-201ENST00000384651 107 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 MIR194-1-201ENST00000384892 85 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 RNA5SP504-201ENST00000410676 117 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 AC004965.1-201ENST00000413033 213 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 SNRPGP13-201ENST00000442212 177 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 AC027288.2-201ENST00000553028 243 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 SUB1P3-201ENST00000564581 315 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 AC012557.2-201ENST00000605919 418 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 AL359075.3-201ENST00000613288 217 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 AL078604.3-201ENST00000615580 211 ntBASIC1.29□□□□□ -2.2
NIPAL3Q6P499 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
NIPAL3Q6P499 RNU4-13P-201ENST00000364019 141 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 RNU6-280P-201ENST00000364145 104 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 SNORD87-201ENST00000364849 89 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 MIR513A1-201ENST00000385138 129 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 RNA5SP109-201ENST00000391010 116 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 SNORA17.3-201ENST00000391159 129 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 RN7SKP51-201ENST00000410781 304 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 AC009161.1-201ENST00000417306 376 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.28□□□□□ -2.2
NIPAL3Q6P499 RPL30P13-201ENST00000418873 348 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 RPL30P16-201ENST00000419341 429 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 AL445305.1-201ENST00000432577 575 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 MTATP6P13-201ENST00000438531 667 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 RNU1-92P-201ENST00000517017 135 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 RNA5SP454-201ENST00000517231 127 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.28□□□□□ -2.2
NIPAL3Q6P499 AC080013.6-201ENST00000606185 215 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 AC090617.10-201ENST00000624308 134 ntBASIC1.28□□□□□ -2.2
NIPAL3Q6P499 MTND4P12-201ENST00000498999 1377 ntBASIC1.27□□□□□ -2.21
NIPAL3Q6P499 MIR26B-201ENST00000362251 77 ntBASIC1.27□□□□□ -2.21
NIPAL3Q6P499 RNU6-1266P-201ENST00000362794 105 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms