Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 Y_RNA.405-201ENST00000383979 100 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 RNU6-26P-201ENST00000383985 107 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.431-201ENST00000384086 102 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.451-201ENST00000384200 100 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.524-201ENST00000384564 100 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.561-201ENST00000384694 100 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.577-201ENST00000384794 101 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 MIR32-201ENST00000384965 70 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 RNA5SP213-201ENST00000391031 106 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 RNU6-1093P-201ENST00000391194 107 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 RNU1-139P-201ENST00000391307 165 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 MIR1294-201ENST00000408503 142 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 MTND4P28-201ENST00000426217 387 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 MTND3P23-201ENST00000431980 347 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 MTCO3P29-201ENST00000432119 779 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AC009238.1-201ENST00000442165 424 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AL035666.1-201ENST00000446195 348 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AC009237.6-201ENST00000446969 424 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF544Q6NX49 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.59□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.675-201ENST00000516389 149 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AC034114.1-201ENST00000520293 285 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF544Q6NX49 DEFB131C-201ENST00000528817 165 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.59□□□□□ -2.15
ZNF544Q6NX49 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 HSBP1P1-201ENST00000555205 166 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF544Q6NX49 MIR3126-201ENST00000577443 74 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AC016727.2-201ENST00000603988 621 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AL773524.1-201ENST00000614065 229 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AC084781.2-201ENST00000615568 161 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 AC091925.1-201ENST00000623204 462 ntBASIC1.59□□□□□ -2.15
ZNF544Q6NX49 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
ZNF544Q6NX49 RNU4-42P-201ENST00000364738 142 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.395-201ENST00000383945 109 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 RNU6-245P-201ENST00000384020 107 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 RNU6-700P-201ENST00000391043 107 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 RNU6-159P-201ENST00000391080 106 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 MIR190B-201ENST00000401119 79 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 RNU6-1304P-201ENST00000411374 106 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 AL353997.1-201ENST00000432936 108 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 RPL30P15-201ENST00000457129 321 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 RNU6-58P-201ENST00000517143 103 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.58□□□□□ -2.16
ZNF544Q6NX49 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.58□□□□□ -2.16
ZNF544Q6NX49 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.58□□□□□ -2.16
ZNF544Q6NX49 AL355802.3-201ENST00000607571 545 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 AC022202.1-201ENST00000613515 211 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 MIR1248-201ENST00000629190 106 ntBASIC1.58□□□□□ -2.16
ZNF544Q6NX49 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
ZNF544Q6NX49 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
ZNF544Q6NX49 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
ZNF544Q6NX49 RNU6-874P-201ENST00000362390 105 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 RNU6-490P-201ENST00000362985 107 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.146-201ENST00000363549 102 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 SNORD42.2-201ENST00000365570 69 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 MIR487A-201ENST00000385009 80 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 AL158823.1-201ENST00000418441 478 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 AC009237.7-201ENST00000447357 229 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.639-201ENST00000458981 102 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.638-201ENST00000459374 113 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 AC022493.2-201ENST00000506122 481 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 AC093303.1-201ENST00000514549 295 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.706-201ENST00000516933 99 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 RNU6-667P-201ENST00000517186 102 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.57□□□□□ -2.16
ZNF544Q6NX49 AC004584.2-201ENST00000570407 410 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ZNF544Q6NX49 AC080078.3-201ENST00000605407 463 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.57□□□□□ -2.16
ZNF544Q6NX49 AC005562.2-201ENST00000618264 111 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
ZNF544Q6NX49 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.364-201ENST00000365532 101 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.460-201ENST00000384255 102 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.463-201ENST00000384271 102 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 MIR10B-201ENST00000385011 110 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 AC004866.1-201ENST00000411748 78 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 SRIP3-201ENST00000413200 219 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.56□□□□□ -2.16
ZNF544Q6NX49 AC007098.1-201ENST00000420122 367 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.56□□□□□ -2.16
ZNF544Q6NX49 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.56□□□□□ -2.16
ZNF544Q6NX49 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.56□□□□□ -2.16
ZNF544Q6NX49 AP000870.1-201ENST00000472927 406 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 RNU6-1114P-201ENST00000516022 107 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 RNU6-120P-201ENST00000516077 103 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 RNU6-991P-201ENST00000516168 107 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 RNU6-344P-201ENST00000516635 111 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 RNA5SP137-201ENST00000516833 135 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.56□□□□□ -2.16
ZNF544Q6NX49 AC233702.2-202ENST00000562547 291 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 AC090517.1-201ENST00000569307 266 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 MIR3683-201ENST00000580847 82 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms