Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 RNA5SP504-201ENST00000410676 117 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 RPL30P16-201ENST00000419341 429 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 AC108667.1-201ENST00000428618 249 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 USP9YP30-201ENST00000430729 455 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.89□□□□□ -2.11
CALD1Q05682 MTND1P4-201ENST00000435196 415 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 MTND1P17-201ENST00000448961 204 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 RNU6-498P-201ENST00000459468 107 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 AC069439.1-201ENST00000494739 167 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 RNU2-34P-201ENST00000516534 121 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 AC027288.2-201ENST00000553028 243 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 MIR4790-201ENST00000577799 79 ntBASIC1.89□□□□□ -2.11
CALD1Q05682 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CALD1Q05682 SNORA33-201ENST00000363664 130 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 SNORD115-8-201ENST00000363856 82 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 SNORD115-38-201ENST00000365037 82 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 SNORA67.2-201ENST00000384300 149 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CALD1Q05682 RNU6-174P-201ENST00000410406 106 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 RNU6-57P-201ENST00000411348 103 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 AC243428.1-201ENST00000421099 264 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 RNU7-57P-201ENST00000459540 60 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.88□□□□□ -2.11
CALD1Q05682 RNA5SP54-201ENST00000516951 92 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 RNU6-58P-201ENST00000517143 103 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 RNU1-54P-201ENST00000517181 120 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.88□□□□□ -2.11
CALD1Q05682 UBL5P4-201ENST00000562584 236 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.88□□□□□ -2.11
CALD1Q05682 MIR4273-201ENST00000582824 84 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 AC018638.8-201ENST00000588755 281 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 AL078596.1-201ENST00000624856 447 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 AL133216.2-202ENST00000634512 349 ntBASIC1.88□□□□□ -2.11
CALD1Q05682 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CALD1Q05682 RNU6-873P-201ENST00000363833 107 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 MIR934-201ENST00000401241 83 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 RNU4-62P-201ENST00000410125 130 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.87□□□□□ -2.11
CALD1Q05682 MTCO3P29-201ENST00000432119 779 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.87□□□□□ -2.11
CALD1Q05682 AC008834.1-201ENST00000511612 175 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 Y_RNA.682-201ENST00000516457 100 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 SNORA25.14-201ENST00000516481 132 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 RNU6-344P-201ENST00000516635 111 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.87□□□□□ -2.11
CALD1Q05682 MIR5696-201ENST00000578474 85 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 AC016925.2-201ENST00000605108 242 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 AC084782.3-201ENST00000612282 578 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 AC002553.4-201ENST00000616896 331 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 AC008873.1-201ENST00000625051 138 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 MIR338-201ENST00000636369 67 ntBASIC1.87□□□□□ -2.11
CALD1Q05682 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.87□□□□□ -2.11
CALD1Q05682 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
CALD1Q05682 ZNF209P-201ENST00000593450 2304 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 AC010615.1-201ENST00000594254 1764 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CALD1Q05682 Y_RNA.48-201ENST00000362710 103 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 RNU6-727P-201ENST00000363592 107 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 Y_RNA.473-201ENST00000384333 102 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 RNU6-541P-201ENST00000384709 110 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 MIR520A-201ENST00000384862 85 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 MIR30A-201ENST00000385092 71 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.86□□□□□ -2.11
CALD1Q05682 RNU2-7P-201ENST00000410794 178 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 FCF1P9-201ENST00000412546 282 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.86□□□□□ -2.11
CALD1Q05682 HSPE1P9-201ENST00000440046 311 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.86□□□□□ -2.11
CALD1Q05682 AC084364.2-201ENST00000546924 395 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 AL161670.1-201ENST00000554348 137 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 MIR3124-201ENST00000582636 67 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 AL161722.3-201ENST00000605789 2983 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 SNORD11B-201ENST00000607707 90 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 AL353149.1-201ENST00000610667 244 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 MIR8074-201ENST00000615081 81 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.86□□□□□ -2.11
CALD1Q05682 MTND4P12-201ENST00000498999 1377 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CALD1Q05682 SNORD87-201ENST00000364849 89 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 RNU6-245P-201ENST00000384020 107 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 RNU6-842P-201ENST00000384269 107 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 MIR548B-201ENST00000385247 97 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 AL139396.1-201ENST00000421137 167 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 EIF1P1-201ENST00000421436 341 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 SNRPGP13-201ENST00000442212 177 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 AC074290.1-201ENST00000448883 135 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 RNU6-329P-201ENST00000459618 107 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 RNA5SP458-201ENST00000516188 119 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.85□□□□□ -2.11
CALD1Q05682 MIR4742-201ENST00000581069 85 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 MIR7974-201ENST00000615835 79 ntBASIC1.85□□□□□ -2.11
CALD1Q05682 MIR126-201ENST00000362291 85 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 snoU2-30.2-201ENST00000362805 70 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 RNU6-1019P-201ENST00000364424 107 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 RNU6-17P-201ENST00000384245 107 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 RNU6-18P-201ENST00000384527 107 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 MIR150-201ENST00000385048 84 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms