Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 SNORD114-26-201ENST00000363543 72 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 RNU6-414P-201ENST00000363705 104 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 RNU6-790P-201ENST00000384479 105 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CSTF1Q05048 EIF4E2P1-201ENST00000393781 255 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.48□□□□□ -2.17
CSTF1Q05048 AL356776.1-201ENST00000406574 447 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.48□□□□□ -2.17
CSTF1Q05048 AC004386.2-201ENST00000441858 148 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 AC007395.1-201ENST00000451333 677 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 RNU7-187P-201ENST00000458985 68 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 AC007547.1-201ENST00000462177 490 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.48□□□□□ -2.17
CSTF1Q05048 AC025465.3-201ENST00000510570 311 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 RNU6-273P-201ENST00000516937 96 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 RNU6-1314P-201ENST00000517139 104 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.48□□□□□ -2.17
CSTF1Q05048 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.48□□□□□ -2.17
CSTF1Q05048 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.48□□□□□ -2.17
CSTF1Q05048 MIR4753-201ENST00000585119 83 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 MIR3976-201ENST00000606807 139 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CSTF1Q05048 AC022709.1-201ENST00000615967 87 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.48□□□□□ -2.17
CSTF1Q05048 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.48□□□□□ -2.17
CSTF1Q05048 RNU1-76P-201ENST00000362903 159 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 Y_RNA.184-201ENST00000363884 108 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CSTF1Q05048 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.47□□□□□ -2.17
CSTF1Q05048 ARL5AP1-201ENST00000418991 388 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 SNRPEP10-201ENST00000420249 274 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.47□□□□□ -2.17
CSTF1Q05048 MTND1P11-201ENST00000456661 876 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 AC016925.1-201ENST00000458303 298 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.47□□□□□ -2.17
CSTF1Q05048 RNU6-358P-201ENST00000516564 75 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 DEFB131C-201ENST00000528817 165 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.47□□□□□ -2.17
CSTF1Q05048 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.47□□□□□ -2.17
CSTF1Q05048 AC026371.1-201ENST00000551867 419 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.47□□□□□ -2.17
CSTF1Q05048 SUB1P4-201ENST00000566062 339 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 AC060780.3-201ENST00000589464 80 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 AC005520.5-201ENST00000613926 164 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 MIR6779-201ENST00000617283 64 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 AC005562.2-201ENST00000618264 111 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.47□□□□□ -2.17
CSTF1Q05048 CASC19-280ENST00000642102 1351 ntBASIC1.47□□□□□ -2.17
CSTF1Q05048 AC121333.1-201ENST00000567488 2709 ntBASIC1.46□□□□□ -2.17
CSTF1Q05048 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CSTF1Q05048 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CSTF1Q05048 RNU6-112P-201ENST00000363599 104 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 Y_RNA.473-201ENST00000384333 102 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 PDCL2P1-201ENST00000419302 352 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 MTCO3P46-201ENST00000425787 232 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 MTATP6P13-201ENST00000438531 667 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.46□□□□□ -2.18
CSTF1Q05048 AC016717.1-201ENST00000448918 286 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 HSPE1P24-201ENST00000450782 238 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 TRBVA-201ENST00000498804 316 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.46□□□□□ -2.18
CSTF1Q05048 AC091885.1-201ENST00000506658 268 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.46□□□□□ -2.18
CSTF1Q05048 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.46□□□□□ -2.18
CSTF1Q05048 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.46□□□□□ -2.18
CSTF1Q05048 AL117351.2-201ENST00000513571 157 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 RNU4-49P-201ENST00000516080 140 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.46□□□□□ -2.18
CSTF1Q05048 U6atac.1-201ENST00000616025 117 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 MIR8063-201ENST00000621930 81 ntBASIC1.46□□□□□ -2.18
CSTF1Q05048 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CSTF1Q05048 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSTF1Q05048 Y_RNA.135-201ENST00000363439 95 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 SNORD113-7-201ENST00000363762 77 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 RNU1-96P-201ENST00000364163 162 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 Y_RNA.212-201ENST00000364177 102 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 RNU6-1286P-201ENST00000383871 107 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 RNU6-95P-201ENST00000384697 107 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 MT-TL1-201ENST00000386347 75 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 MIR1267-201ENST00000408723 78 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 MTCO1P29-201ENST00000496868 288 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 AC018710.1-201ENST00000506509 158 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 AF235103.2-201ENST00000525753 346 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CSTF1Q05048 AL137100.2-201ENST00000555786 315 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 AC069114.2-201ENST00000604699 304 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 RPL17P51-201ENST00000605218 238 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 AL138726.1-201ENST00000614873 333 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 AC009248.2-201ENST00000619826 254 ntBASIC1.45□□□□□ -2.18
CSTF1Q05048 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.45□□□□□ -2.18
CSTF1Q05048 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSTF1Q05048 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CSTF1Q05048 RNU1-22P-201ENST00000363334 158 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 Y_RNA.151-201ENST00000363566 112 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 RNU6-1059P-201ENST00000363752 98 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 Y_RNA.301-201ENST00000364990 103 ntBASIC1.44□□□□□ -2.18
CSTF1Q05048 Y_RNA.414-201ENST00000384011 101 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms