Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MTCO3P10-201ENST00000455912 772 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.04□□□□□ -2.42
ABCA4P78363 RNU6-377P-201ENST00000515965 102 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 RNU6-504P-201ENST00000516568 104 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC009712.1-201ENST00000564938 316 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.04□□□□□ -2.42
ABCA4P78363 MIR548AC-201ENST00000585049 88 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.04□□□□□ -2.42
ABCA4P78363 RNU1-29P-201ENST00000606574 126 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC009994.1-201ENST00000606889 253 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AC012467.1-201ENST00000607740 256 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 AL359075.3-201ENST00000613288 217 ntBASIC-0.04□□□□□ -2.42
ABCA4P78363 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
ABCA4P78363 RNU4-76P-201ENST00000364509 141 ntBASIC-0.05□□□□□ -2.42
ABCA4P78363 RNU6V-201ENST00000384105 107 ntBASIC-0.05□□□□□ -2.42
ABCA4P78363 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.05□□□□□ -2.42
ABCA4P78363 AL606517.2-201ENST00000442855 241 ntBASIC-0.05□□□□□ -2.42
ABCA4P78363 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.05□□□□□ -2.42
ABCA4P78363 RNU1-86P-201ENST00000516108 154 ntBASIC-0.05□□□□□ -2.42
ABCA4P78363 RNU1-107P-201ENST00000516617 154 ntBASIC-0.05□□□□□ -2.42
ABCA4P78363 AC107934.1-201ENST00000522215 217 ntBASIC-0.05□□□□□ -2.42
ABCA4P78363 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.05□□□□□ -2.42
ABCA4P78363 MIR4804-201ENST00000581683 73 ntBASIC-0.05□□□□□ -2.42
ABCA4P78363 AC092447.9-201ENST00000603395 144 ntBASIC-0.05□□□□□ -2.42
ABCA4P78363 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.05□□□□□ -2.42
ABCA4P78363 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.05□□□□□ -2.42
ABCA4P78363 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.05□□□□□ -2.42
ABCA4P78363 MIRLET7C-201ENST00000362160 84 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 RNY4P16-201ENST00000364768 94 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 SNORA2B-201ENST00000384583 137 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 CALM2P3-201ENST00000400429 449 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 MIR1253-201ENST00000408273 105 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 RPS24P1-201ENST00000438550 371 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.06□□□□□ -2.42
ABCA4P78363 AC107401.1-201ENST00000503426 685 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 AC104136.1-201ENST00000512969 394 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 RNU6-863P-201ENST00000515989 104 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 AC022523.2-201ENST00000561045 150 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 NAMPTP3-201ENST00000569273 224 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 MIR5006-201ENST00000583027 110 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 AC008752.3-201ENST00000588113 712 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.06□□□□□ -2.42
ABCA4P78363 AC025449.1-201ENST00000603896 529 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 AC064807.4-201ENST00000607201 407 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 AC078880.5-201ENST00000617845 421 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 RNU6-726P-201ENST00000364680 107 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.06□□□□□ -2.42
ABCA4P78363 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 MIR578-201ENST00000384828 96 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 MIR549A-201ENST00000385268 96 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 SNORD105-201ENST00000386910 85 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 RNA5SP300-201ENST00000391197 107 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 SNORA75.6-201ENST00000391318 127 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 RNA5SP95-201ENST00000410319 137 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.06□□□□□ -2.42
ABCA4P78363 RNU1-142P-201ENST00000516682 145 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
ABCA4P78363 AL592221.1-201ENST00000605266 382 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 MIR8076-201ENST00000611401 83 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 MTND5P32-201ENST00000560711 1802 ntBASIC-0.06□□□□□ -2.42
ABCA4P78363 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 RNA5SP496-201ENST00000391240 109 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 MRPL42P3-201ENST00000401492 326 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 SEPT7P4-201ENST00000437076 306 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 RNU6-475P-201ENST00000516073 104 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.07□□□□□ -2.42
ABCA4P78363 AC026616.1-201ENST00000523157 525 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.07□□□□□ -2.42
ABCA4P78363 AC004584.2-201ENST00000570407 410 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 MIR5692A1-201ENST00000580523 69 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 RAC1P9-201ENST00000604990 392 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 AP000943.4-201ENST00000622912 357 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.07□□□□□ -2.42
ABCA4P78363 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.07□□□□□ -2.42
ABCA4P78363 SNORD115-24-201ENST00000363528 82 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 SNORD115-41-201ENST00000363608 82 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 RNU6-205P-201ENST00000390858 107 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 MIR1302-7-201ENST00000408841 72 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 CDK8P2-201ENST00000415020 547 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 BTF3P11-201ENST00000426582 477 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.07□□□□□ -2.42
ABCA4P78363 DEFB131C-201ENST00000528817 165 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 AC004832.4-201ENST00000608952 331 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.07□□□□□ -2.42
ABCA4P78363 AC011155.2-201ENST00000623202 216 ntBASIC-0.07□□□□□ -2.42
ABCA4P78363 AC073343.1-201ENST00000328239 651 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 MIR1827-201ENST00000408549 66 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 RNA5SP451-201ENST00000410588 110 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 NFU1P2-201ENST00000448700 469 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 PCNPP5-201ENST00000452246 481 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms