Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AL359851.1-201ENST00000569460 4997 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 RNU6-874P-201ENST00000362390 105 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 RNU6-727P-201ENST00000363592 107 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 U3.8-201ENST00000363675 217 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 RNU6-99P-201ENST00000364721 107 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 RNA5SP126-201ENST00000365092 109 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 Y_RNA.509-201ENST00000384506 99 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 RNY4P36-201ENST00000391116 96 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RPS3AP61247 RN7SKP192-201ENST00000411291 327 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 AF228730.4-201ENST00000421457 183 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.06□□□□□ -2.08
RPS3AP61247 RPS15AP28-201ENST00000435088 386 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 RPL23AP7-203ENST00000449021 469 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 TRBV12-1-201ENST00000479785 344 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 AC022493.2-201ENST00000506122 481 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 RNVU1-2-201ENST00000516326 135 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 Y_RNA.683-201ENST00000516508 93 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 Y_RNA.718-201ENST00000517110 102 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 AC093023.1-201ENST00000547375 507 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 MIR6132-201ENST00000622083 109 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 AC022513.1-201ENST00000624512 117 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 snoZ196.1-201ENST00000625269 89 ntBASIC2.06□□□□□ -2.08
RPS3AP61247 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.06□□□□□ -2.08
RPS3AP61247 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RPS3AP61247 MTND5P35-201ENST00000557537 1720 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RPS3AP61247 AC245060.5-201ENST00000610778 3293 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 RNU4-79P-201ENST00000362764 141 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 Y_RNA.415-201ENST00000384012 112 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 MTCO2P27-201ENST00000420740 428 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 AC244636.1-201ENST00000421152 228 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.05□□□□□ -2.08
RPS3AP61247 ELOCP24-201ENST00000456370 334 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 SNORD19B-201ENST00000459623 84 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 YWHAEP4-201ENST00000505390 198 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 RNU6-470P-201ENST00000515954 104 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 CYCSP23-201ENST00000519781 313 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.05□□□□□ -2.08
RPS3AP61247 AC091544.4-201ENST00000555268 342 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 MIR4299-201ENST00000577899 72 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.05□□□□□ -2.08
RPS3AP61247 MZT1P2-201ENST00000604387 248 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 AL353149.1-201ENST00000610667 244 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 AL627230.6-201ENST00000611129 280 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 AC084781.2-201ENST00000615568 161 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 AC104985.2-201ENST00000620598 500 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.05□□□□□ -2.08
RPS3AP61247 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RPS3AP61247 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RPS3AP61247 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 SNORD87-201ENST00000364849 89 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 XGY1-201ENST00000381172 446 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 Y_RNA.557-201ENST00000384680 107 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 MIR625-201ENST00000385047 85 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 MT-TD-201ENST00000387419 68 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 SNORA11.4-201ENST00000408823 129 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 RNU6-57P-201ENST00000411348 103 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 AC060773.1-201ENST00000421698 310 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.04□□□□□ -2.08
RPS3AP61247 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.04□□□□□ -2.08
RPS3AP61247 RPL23AP6-201ENST00000446637 472 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 RNU7-152P-201ENST00000458982 64 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 MIR2053-201ENST00000459295 91 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.04□□□□□ -2.08
RPS3AP61247 AC011406.1-201ENST00000512440 370 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 MIR2355-201ENST00000517199 87 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 SNRPGP18-201ENST00000553000 214 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RPS3AP61247 AC080078.3-201ENST00000605407 463 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.04□□□□□ -2.08
RPS3AP61247 MIR1244-1-201ENST00000612829 85 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 AC126177.8-201ENST00000618339 1015 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 MIR6766-201ENST00000622641 72 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 MIR1244-3-201ENST00000635744 85 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 MIR1244-2-201ENST00000636449 85 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 MIR1244-4-202ENST00000636813 85 ntBASIC2.04□□□□□ -2.08
RPS3AP61247 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.08
RPS3AP61247 U8.2-201ENST00000363156 134 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 Y_RNA.358-201ENST00000365491 99 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 SNORA70B-201ENST00000384210 135 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 MIR548B-201ENST00000385247 97 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 Z98742.3-201ENST00000418637 326 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 AC008134.1-201ENST00000420943 193 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 DPH3P2-201ENST00000422618 250 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.03□□□□□ -2.08
RPS3AP61247 AC010095.1-201ENST00000443543 144 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 RNU6-221P-201ENST00000459541 99 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 RNU6-1041P-201ENST00000516254 102 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 RNU7-4P-201ENST00000516961 62 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
RPS3AP61247 AC125232.2-201ENST00000592457 143 ntBASIC2.03□□□□□ -2.08
RPS3AP61247 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
RPS3AP61247 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RPS3AP61247 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.02□□□□□ -2.09
RPS3AP61247 MIR1185-2-201ENST00000408687 86 ntBASIC2.02□□□□□ -2.09
RPS3AP61247 RNU6-1156P-201ENST00000410365 100 ntBASIC2.02□□□□□ -2.09
RPS3AP61247 RNU6-1001P-201ENST00000411265 100 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms