Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC099513.1-201ENST00000490423 301 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 RNA5SP54-201ENST00000516951 92 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 AC027288.2-201ENST00000553028 243 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 AC015688.6-201ENST00000577737 104 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 MIR4303-201ENST00000581299 66 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 AL078596.1-201ENST00000624856 447 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.24□□□□□ -2.21
PKNOX1P55347 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
PKNOX1P55347 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.24□□□□□ -2.21
PKNOX1P55347 RNU6-534P-201ENST00000364877 106 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 Y_RNA.402-201ENST00000383972 102 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 RNU6-245P-201ENST00000384020 107 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 SNORD26-201ENST00000384147 75 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 RNA5SP467-201ENST00000391274 118 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 MIR320B2-201ENST00000408479 138 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 RNU6-1148P-201ENST00000410992 104 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 AC027119.1-201ENST00000440877 241 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.23□□□□□ -2.21
PKNOX1P55347 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.23□□□□□ -2.21
PKNOX1P55347 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.23□□□□□ -2.21
PKNOX1P55347 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 RPL30P10-201ENST00000488148 337 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 RNU6-58P-201ENST00000517143 103 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 AC025647.1-201ENST00000517879 253 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 AK6P2-201ENST00000549020 471 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.23□□□□□ -2.21
PKNOX1P55347 TPRKBP2-201ENST00000565969 475 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.23□□□□□ -2.21
PKNOX1P55347 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.23□□□□□ -2.21
PKNOX1P55347 AC006504.8-201ENST00000621046 635 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 snoZ196.1-201ENST00000625269 89 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
PKNOX1P55347 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
PKNOX1P55347 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
PKNOX1P55347 SNORA72.2-201ENST00000365028 127 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 Y_RNA.319-201ENST00000365138 92 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 SNORD116-11-201ENST00000383882 92 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 RNU6-306P-201ENST00000384617 107 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 MIR1261-201ENST00000408659 82 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 AL589823.1-201ENST00000429577 183 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 AL445305.1-201ENST00000432577 575 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.22□□□□□ -2.21
PKNOX1P55347 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.22□□□□□ -2.21
PKNOX1P55347 RNU6-221P-201ENST00000459541 99 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.22□□□□□ -2.21
PKNOX1P55347 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.22□□□□□ -2.21
PKNOX1P55347 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.22□□□□□ -2.21
PKNOX1P55347 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 SNORD11B-201ENST00000607707 90 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 AC097065.2-201ENST00000608159 533 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 AL121890.5-201ENST00000620848 304 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 U6.108-201ENST00000637764 58 ntBASIC1.22□□□□□ -2.21
PKNOX1P55347 MTND4P12-201ENST00000498999 1377 ntBASIC1.21□□□□□ -2.21
PKNOX1P55347 RNY4P14-201ENST00000363656 96 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 RNU6-873P-201ENST00000363833 107 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 MIR153-2-201ENST00000385225 87 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.21□□□□□ -2.22
PKNOX1P55347 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.21□□□□□ -2.22
PKNOX1P55347 AL606517.2-201ENST00000442855 241 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 AC074290.1-201ENST00000448883 135 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 RPL31P58-201ENST00000469001 379 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.21□□□□□ -2.22
PKNOX1P55347 ACA59.1-201ENST00000515966 143 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 RNU6-1146P-201ENST00000516282 102 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.21□□□□□ -2.22
PKNOX1P55347 AC019176.1-201ENST00000518519 225 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.21□□□□□ -2.22
PKNOX1P55347 EIF1P4-201ENST00000572664 335 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 MIR5696-201ENST00000578474 85 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 AC124303.1-201ENST00000605703 360 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 AC019193.3-201ENST00000609144 554 ntBASIC1.21□□□□□ -2.22
PKNOX1P55347 RNU1-17P-201ENST00000363022 152 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 SNORD87-201ENST00000364849 89 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 MIR515-2-201ENST00000384883 83 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 MIR515-1-201ENST00000384884 83 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 RNA5SP109-201ENST00000391010 116 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 AC243428.1-201ENST00000421099 264 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 RPS27P1-201ENST00000450552 247 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 AL163195.1-201ENST00000496941 348 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 AC079140.2-201ENST00000506193 142 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 AC105313.1-201ENST00000509121 353 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 RNU6-864P-201ENST00000516256 108 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 RNU6-720P-201ENST00000516363 108 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 SNORA25.14-201ENST00000516481 132 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 RNU6-1314P-201ENST00000517139 104 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 RNA5SP454-201ENST00000517231 127 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.2□□□□□ -2.22
PKNOX1P55347 AP000889.1-201ENST00000530968 660 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
PKNOX1P55347 UBL5P4-201ENST00000562584 236 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 AC005668.1-201ENST00000571142 476 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 AC009248.2-201ENST00000619826 254 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 AC009033.1-201ENST00000624279 431 ntBASIC1.2□□□□□ -2.22
PKNOX1P55347 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.2□□□□□ -2.22
PKNOX1P55347 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms