Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC092794.1-201ENST00000612734 582 ntBASIC1.68□□□□□ -2.14
VCPP55072 U6atac.1-201ENST00000616025 117 ntBASIC1.68□□□□□ -2.14
VCPP55072 AC137590.2-201ENST00000619709 240 ntBASIC1.68□□□□□ -2.14
VCPP55072 AC009248.2-201ENST00000619826 254 ntBASIC1.68□□□□□ -2.14
VCPP55072 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.68□□□□□ -2.14
VCPP55072 LINC02555-201ENST00000563933 1951 ntBASIC1.68□□□□□ -2.14
VCPP55072 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.68□□□□□ -2.14
VCPP55072 RNU6-23P-201ENST00000363283 107 ntBASIC1.67□□□□□ -2.14
VCPP55072 RNA5SP493-201ENST00000364115 91 ntBASIC1.67□□□□□ -2.14
VCPP55072 Y_RNA.205-201ENST00000364128 113 ntBASIC1.67□□□□□ -2.14
VCPP55072 RNU6-1026P-201ENST00000384465 108 ntBASIC1.67□□□□□ -2.14
VCPP55072 RNU6-306P-201ENST00000384617 107 ntBASIC1.67□□□□□ -2.14
VCPP55072 SNORA12.2-201ENST00000391040 156 ntBASIC1.67□□□□□ -2.14
VCPP55072 RNU6-510P-201ENST00000391239 108 ntBASIC1.67□□□□□ -2.14
VCPP55072 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.67□□□□□ -2.14
VCPP55072 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.67□□□□□ -2.14
VCPP55072 RNU6-329P-201ENST00000459618 107 ntBASIC1.67□□□□□ -2.14
VCPP55072 RNU6-358P-201ENST00000516564 75 ntBASIC1.67□□□□□ -2.14
VCPP55072 SNORA44.1-201ENST00000517031 108 ntBASIC1.67□□□□□ -2.14
VCPP55072 AC060780.3-201ENST00000589464 80 ntBASIC1.67□□□□□ -2.14
VCPP55072 AC122108.2-201ENST00000611946 526 ntBASIC1.67□□□□□ -2.14
VCPP55072 AC084782.3-201ENST00000612282 578 ntBASIC1.67□□□□□ -2.14
VCPP55072 AL590240.4-201ENST00000616908 390 ntBASIC1.67□□□□□ -2.14
VCPP55072 AC005562.2-201ENST00000618264 111 ntBASIC1.67□□□□□ -2.14
VCPP55072 SCARNA4-201ENST00000629045 128 ntBASIC1.67□□□□□ -2.14
VCPP55072 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.67□□□□□ -2.14
VCPP55072 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VCPP55072 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
VCPP55072 MTND1P17-201ENST00000448961 204 ntBASIC1.66□□□□□ -2.14
VCPP55072 AC016925.1-201ENST00000458303 298 ntBASIC1.66□□□□□ -2.14
VCPP55072 AC007215.1-201ENST00000464893 276 ntBASIC1.66□□□□□ -2.14
VCPP55072 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.66□□□□□ -2.14
VCPP55072 AL161670.1-201ENST00000554348 137 ntBASIC1.66□□□□□ -2.14
VCPP55072 AL137100.2-201ENST00000555786 315 ntBASIC1.66□□□□□ -2.14
VCPP55072 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.66□□□□□ -2.14
VCPP55072 AC026470.2-201ENST00000561492 181 ntBASIC1.66□□□□□ -2.14
VCPP55072 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.66□□□□□ -2.14
VCPP55072 MIR3169-201ENST00000578032 83 ntBASIC1.66□□□□□ -2.14
VCPP55072 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.66□□□□□ -2.14
VCPP55072 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.66□□□□□ -2.14
VCPP55072 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.66□□□□□ -2.14
VCPP55072 MTND5P9-201ENST00000503854 1755 ntBASIC1.65□□□□□ -2.14
VCPP55072 MIR340-201ENST00000362125 95 ntBASIC1.65□□□□□ -2.15
VCPP55072 MIR424-201ENST00000362227 98 ntBASIC1.65□□□□□ -2.15
VCPP55072 RNU4-9P-201ENST00000364951 139 ntBASIC1.65□□□□□ -2.15
VCPP55072 MIR30A-201ENST00000385092 71 ntBASIC1.65□□□□□ -2.15
VCPP55072 MIR549A-201ENST00000385268 96 ntBASIC1.65□□□□□ -2.15
VCPP55072 SNORA48.1-201ENST00000390879 135 ntBASIC1.65□□□□□ -2.15
VCPP55072 SNORA67.6-201ENST00000391093 99 ntBASIC1.65□□□□□ -2.15
VCPP55072 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.65□□□□□ -2.15
VCPP55072 RPL30P16-201ENST00000419341 429 ntBASIC1.65□□□□□ -2.15
VCPP55072 AC139712.2-201ENST00000424302 339 ntBASIC1.65□□□□□ -2.15
VCPP55072 AC004386.2-201ENST00000441858 148 ntBASIC1.65□□□□□ -2.15
VCPP55072 RNU1-131P-201ENST00000458943 161 ntBASIC1.65□□□□□ -2.15
VCPP55072 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
VCPP55072 AC018710.1-201ENST00000506509 158 ntBASIC1.65□□□□□ -2.15
VCPP55072 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.65□□□□□ -2.15
VCPP55072 RNVU1-2-201ENST00000516326 135 ntBASIC1.65□□□□□ -2.15
VCPP55072 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.65□□□□□ -2.15
VCPP55072 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.65□□□□□ -2.15
VCPP55072 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.65□□□□□ -2.15
VCPP55072 TCL6_2.1-201ENST00000615162 119 ntBASIC1.65□□□□□ -2.15
VCPP55072 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.65□□□□□ -2.15
VCPP55072 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.65□□□□□ -2.15
VCPP55072 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
VCPP55072 RNU6-545P-201ENST00000362681 104 ntBASIC1.64□□□□□ -2.15
VCPP55072 AL356776.1-201ENST00000406574 447 ntBASIC1.64□□□□□ -2.15
VCPP55072 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.64□□□□□ -2.15
VCPP55072 AL139396.1-201ENST00000421137 167 ntBASIC1.64□□□□□ -2.15
VCPP55072 Z82188.1-201ENST00000436709 154 ntBASIC1.64□□□□□ -2.15
VCPP55072 MTATP6P13-201ENST00000438531 667 ntBASIC1.64□□□□□ -2.15
VCPP55072 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.64□□□□□ -2.15
VCPP55072 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.64□□□□□ -2.15
VCPP55072 Y_RNA.682-201ENST00000516457 100 ntBASIC1.64□□□□□ -2.15
VCPP55072 RNU1-54P-201ENST00000517181 120 ntBASIC1.64□□□□□ -2.15
VCPP55072 MIR4790-201ENST00000577799 79 ntBASIC1.64□□□□□ -2.15
VCPP55072 MIR4742-201ENST00000581069 85 ntBASIC1.64□□□□□ -2.15
VCPP55072 MIR5006-201ENST00000583027 110 ntBASIC1.64□□□□□ -2.15
VCPP55072 AC010900.2-201ENST00000604508 210 ntBASIC1.64□□□□□ -2.15
VCPP55072 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.64□□□□□ -2.15
VCPP55072 MIR6128-201ENST00000615528 109 ntBASIC1.64□□□□□ -2.15
VCPP55072 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.64□□□□□ -2.15
VCPP55072 ZNF209P-201ENST00000593450 2304 ntBASIC1.64□□□□□ -2.15
VCPP55072 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.63□□□□□ -2.15
VCPP55072 CBX3P1-201ENST00000325243 554 ntBASIC1.63□□□□□ -2.15
VCPP55072 Y_RNA.248-201ENST00000364501 109 ntBASIC1.63□□□□□ -2.15
VCPP55072 RNU6-596P-201ENST00000365395 98 ntBASIC1.63□□□□□ -2.15
VCPP55072 MIR598-201ENST00000384868 97 ntBASIC1.63□□□□□ -2.15
VCPP55072 MIR487A-201ENST00000385009 80 ntBASIC1.63□□□□□ -2.15
VCPP55072 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
VCPP55072 MIR300-201ENST00000401138 83 ntBASIC1.63□□□□□ -2.15
VCPP55072 RNA5SP100-201ENST00000410903 110 ntBASIC1.63□□□□□ -2.15
VCPP55072 RNA5SP59-201ENST00000410922 110 ntBASIC1.63□□□□□ -2.15
VCPP55072 MTND3P8-201ENST00000412909 339 ntBASIC1.63□□□□□ -2.15
VCPP55072 MTCO3P46-201ENST00000425787 232 ntBASIC1.63□□□□□ -2.15
VCPP55072 MTCO1P44-201ENST00000441935 243 ntBASIC1.63□□□□□ -2.15
VCPP55072 AC007395.1-201ENST00000451333 677 ntBASIC1.63□□□□□ -2.15
VCPP55072 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.63□□□□□ -2.15
VCPP55072 MTCO3P8-201ENST00000453691 755 ntBASIC1.63□□□□□ -2.15
VCPP55072 AC092991.1-201ENST00000477176 376 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms