Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNU2-1-201ENST00000618664 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.6-201ENST00000619225 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.5-201ENST00000619465 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.10-201ENST00000620268 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.31□□□□□ -2.04
CLCN3P51790 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLCN3P51790 ZNF72P-201ENST00000425869 1908 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CLCN3P51790 RNU6-1309P-201ENST00000363305 108 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 Y_RNA.144-201ENST00000363521 113 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 RNU6-450P-201ENST00000364654 107 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 Y_RNA.276-201ENST00000364732 109 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 Y_RNA.557-201ENST00000384680 107 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 MIR764-201ENST00000390811 85 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 RNU2-48P-201ENST00000410694 191 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 AL139156.1-201ENST00000412785 841 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 SUMO1P4-201ENST00000429430 302 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 AC073910.1-201ENST00000445047 438 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.3□□□□□ -2.04
CLCN3P51790 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.3□□□□□ -2.04
CLCN3P51790 RNU6-1198P-201ENST00000516904 67 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 Y_RNA.715-201ENST00000517082 110 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 AC034114.1-201ENST00000520293 285 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.3□□□□□ -2.04
CLCN3P51790 AC026470.2-201ENST00000561492 181 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 AC090617.3-201ENST00000573670 475 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 Y_RNA.783-201ENST00000613546 102 ntBASIC2.3□□□□□ -2.04
CLCN3P51790 SNORD14.1-201ENST00000365609 90 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 RNU6-26P-201ENST00000383985 107 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 RNU6-708P-201ENST00000384217 107 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 RNU6-463P-201ENST00000384340 107 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 RNY3P4-201ENST00000384428 101 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 RNU1-148P-201ENST00000384472 162 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 RPL21P1-201ENST00000399532 476 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 EIF1P2-201ENST00000428233 350 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 AL445646.1-201ENST00000431784 216 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 snoU13.6-201ENST00000458785 104 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 TOMM22P6-201ENST00000465035 409 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 MTATP8P1-201ENST00000467115 207 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 AC107032.1-201ENST00000485945 480 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.29□□□□□ -2.04
CLCN3P51790 AC107222.1-201ENST00000510899 637 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 Y_RNA.706-201ENST00000516933 99 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 RNA5SP54-201ENST00000516951 92 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 MIR2355-201ENST00000517199 87 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.29□□□□□ -2.04
CLCN3P51790 AL442163.3-201ENST00000554110 156 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 HSBP1P1-201ENST00000555205 166 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.29□□□□□ -2.04
CLCN3P51790 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
CLCN3P51790 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.29□□□□□ -2.04
CLCN3P51790 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLCN3P51790 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CLCN3P51790 RNU6-222P-201ENST00000362438 107 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 Y_RNA.27-201ENST00000362540 103 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 Y_RNA.358-201ENST00000365491 99 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 SNORA63.7-201ENST00000365579 123 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 Y_RNA.389-201ENST00000383924 113 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 Y_RNA.551-201ENST00000384661 102 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 MIR487A-201ENST00000385009 80 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 MIR153-2-201ENST00000385225 87 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 RNU6-1109P-201ENST00000391187 107 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 RNU6-1093P-201ENST00000391194 107 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 Y_RNA.605-201ENST00000410577 105 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.28□□□□□ -2.04
CLCN3P51790 RNU7-169P-201ENST00000459456 61 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.28□□□□□ -2.04
CLCN3P51790 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCN3P51790 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.28□□□□□ -2.04
CLCN3P51790 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.28□□□□□ -2.04
CLCN3P51790 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLCN3P51790 RNA5SP432-201ENST00000362480 116 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 RNU6-1301P-201ENST00000362724 104 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 RNA5SP393-201ENST00000363423 117 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 RNU6-234P-201ENST00000365229 104 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 RNU6-318P-201ENST00000384283 103 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 MIR32-201ENST00000384965 70 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 MIR10B-201ENST00000385011 110 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 RNU6-159P-201ENST00000391080 106 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 SNORA12-201ENST00000391162 147 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 RNU6-130P-201ENST00000411112 103 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 MTCO3P19-201ENST00000415864 321 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.27□□□□□ -2.05
CLCN3P51790 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCN3P51790 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.27□□□□□ -2.05
CLCN3P51790 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCN3P51790 AP000870.1-201ENST00000472927 406 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 AC010469.2-201ENST00000496412 480 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.27□□□□□ -2.05
CLCN3P51790 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCN3P51790 RNU6-58P-201ENST00000517143 103 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 RNU6-667P-201ENST00000517186 102 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.27□□□□□ -2.05
CLCN3P51790 AC125232.2-201ENST00000592457 143 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 AC124312.5-201ENST00000604451 268 ntBASIC2.27□□□□□ -2.05
CLCN3P51790 RAC1P9-201ENST00000604990 392 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms