Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 RNU1-142P-201ENST00000516682 145 ntBASIC0.48□□□□□ -2.33
CDK9P50750 SCARNA1-201ENST00000517138 166 ntBASIC0.48□□□□□ -2.33
CDK9P50750 AC106038.2-201ENST00000520706 568 ntBASIC0.48□□□□□ -2.33
CDK9P50750 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.48□□□□□ -2.33
CDK9P50750 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.48□□□□□ -2.33
CDK9P50750 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.48□□□□□ -2.33
CDK9P50750 FGF7P1-201ENST00000582820 288 ntBASIC0.48□□□□□ -2.33
CDK9P50750 AC068790.6-201ENST00000602558 258 ntBASIC0.48□□□□□ -2.33
CDK9P50750 AC080078.2-201ENST00000603766 501 ntBASIC0.48□□□□□ -2.33
CDK9P50750 AL353765.1-201ENST00000605514 183 ntBASIC0.48□□□□□ -2.33
CDK9P50750 RNU6-85P-201ENST00000605989 107 ntBASIC0.48□□□□□ -2.33
CDK9P50750 AC104465.1-201ENST00000611365 139 ntBASIC0.48□□□□□ -2.33
CDK9P50750 U6.73-201ENST00000619194 103 ntBASIC0.48□□□□□ -2.33
CDK9P50750 AC006001.4-201ENST00000622243 395 ntBASIC0.48□□□□□ -2.33
CDK9P50750 AC009161.2-201ENST00000624626 138 ntBASIC0.48□□□□□ -2.33
CDK9P50750 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
CDK9P50750 RNY4P34-201ENST00000364779 95 ntBASIC0.47□□□□□ -2.33
CDK9P50750 RNU6-1240P-201ENST00000365155 104 ntBASIC0.47□□□□□ -2.33
CDK9P50750 MIR942-201ENST00000401111 86 ntBASIC0.47□□□□□ -2.33
CDK9P50750 MIR936-201ENST00000401264 98 ntBASIC0.47□□□□□ -2.33
CDK9P50750 AC074290.1-201ENST00000448883 135 ntBASIC0.47□□□□□ -2.33
CDK9P50750 RNU6-1037P-201ENST00000459571 107 ntBASIC0.47□□□□□ -2.33
CDK9P50750 MTND1P22-201ENST00000510572 951 ntBASIC0.47□□□□□ -2.33
CDK9P50750 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
CDK9P50750 RNU6-922P-201ENST00000516753 99 ntBASIC0.47□□□□□ -2.33
CDK9P50750 MIR548AB-201ENST00000584917 84 ntBASIC0.47□□□□□ -2.33
CDK9P50750 AC245014.2-201ENST00000603689 287 ntBASIC0.47□□□□□ -2.33
CDK9P50750 AP000907.4-201ENST00000604143 237 ntBASIC0.47□□□□□ -2.33
CDK9P50750 AC246785.4-201ENST00000605374 287 ntBASIC0.47□□□□□ -2.33
CDK9P50750 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.47□□□□□ -2.33
CDK9P50750 SNORD115-8-201ENST00000363856 82 ntBASIC0.46□□□□□ -2.34
CDK9P50750 RNU4-76P-201ENST00000364509 141 ntBASIC0.46□□□□□ -2.34
CDK9P50750 SNORD115-38-201ENST00000365037 82 ntBASIC0.46□□□□□ -2.34
CDK9P50750 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CDK9P50750 RNU5A-2P-201ENST00000384337 116 ntBASIC0.46□□□□□ -2.34
CDK9P50750 RNU6-297P-201ENST00000384636 107 ntBASIC0.46□□□□□ -2.34
CDK9P50750 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CDK9P50750 AL034345.1-201ENST00000407768 123 ntBASIC0.46□□□□□ -2.34
CDK9P50750 RNU6-195P-201ENST00000411352 109 ntBASIC0.46□□□□□ -2.34
CDK9P50750 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.46□□□□□ -2.34
CDK9P50750 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
CDK9P50750 AL035398.1-201ENST00000430869 322 ntBASIC0.46□□□□□ -2.34
CDK9P50750 RPL31P35-201ENST00000431058 377 ntBASIC0.46□□□□□ -2.34
CDK9P50750 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.46□□□□□ -2.34
CDK9P50750 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.46□□□□□ -2.34
CDK9P50750 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CDK9P50750 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.46□□□□□ -2.34
CDK9P50750 RNU7-180P-201ENST00000459240 63 ntBASIC0.46□□□□□ -2.34
CDK9P50750 AC092436.3-201ENST00000511788 257 ntBASIC0.46□□□□□ -2.34
CDK9P50750 AC025465.4-201ENST00000513422 638 ntBASIC0.46□□□□□ -2.34
CDK9P50750 RNU7-99P-201ENST00000516271 62 ntBASIC0.46□□□□□ -2.34
CDK9P50750 RNU6-917P-201ENST00000516294 104 ntBASIC0.46□□□□□ -2.34
CDK9P50750 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.46□□□□□ -2.34
CDK9P50750 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.46□□□□□ -2.34
CDK9P50750 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.46□□□□□ -2.34
CDK9P50750 AC009229.3-201ENST00000608056 282 ntBASIC0.46□□□□□ -2.34
CDK9P50750 AC004832.4-201ENST00000608952 331 ntBASIC0.46□□□□□ -2.34
CDK9P50750 CASC19-280ENST00000642102 1351 ntBASIC0.45□□□□□ -2.34
CDK9P50750 RNU6-199P-201ENST00000362954 107 ntBASIC0.45□□□□□ -2.34
CDK9P50750 Y_RNA.112-201ENST00000363250 102 ntBASIC0.45□□□□□ -2.34
CDK9P50750 RNU6-282P-201ENST00000365357 103 ntBASIC0.45□□□□□ -2.34
CDK9P50750 SNORA2.2-201ENST00000365473 135 ntBASIC0.45□□□□□ -2.34
CDK9P50750 RNU6-342P-201ENST00000384521 104 ntBASIC0.45□□□□□ -2.34
CDK9P50750 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
CDK9P50750 RNU6-584P-201ENST00000410350 95 ntBASIC0.45□□□□□ -2.34
CDK9P50750 RNU6-57P-201ENST00000411348 103 ntBASIC0.45□□□□□ -2.34
CDK9P50750 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.45□□□□□ -2.34
CDK9P50750 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.45□□□□□ -2.34
CDK9P50750 AC245047.3-201ENST00000429428 127 ntBASIC0.45□□□□□ -2.34
CDK9P50750 CETN4P-201ENST00000432407 469 ntBASIC0.45□□□□□ -2.34
CDK9P50750 AC005002.2-201ENST00000438228 269 ntBASIC0.45□□□□□ -2.34
CDK9P50750 HSFY5P-201ENST00000453726 309 ntBASIC0.45□□□□□ -2.34
CDK9P50750 AL033528.1-201ENST00000453780 140 ntBASIC0.45□□□□□ -2.34
CDK9P50750 snoU13.25-201ENST00000458945 104 ntBASIC0.45□□□□□ -2.34
CDK9P50750 AF186996.7-201ENST00000492781 209 ntBASIC0.45□□□□□ -2.34
CDK9P50750 AC113410.1-201ENST00000505029 247 ntBASIC0.45□□□□□ -2.34
CDK9P50750 RNU6-229P-201ENST00000516614 102 ntBASIC0.45□□□□□ -2.34
CDK9P50750 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.45□□□□□ -2.34
CDK9P50750 SCOCP1-201ENST00000554676 349 ntBASIC0.45□□□□□ -2.34
CDK9P50750 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
CDK9P50750 MIR4424-201ENST00000585257 86 ntBASIC0.45□□□□□ -2.34
CDK9P50750 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.45□□□□□ -2.34
CDK9P50750 AL357312.1-201ENST00000603879 298 ntBASIC0.45□□□□□ -2.34
CDK9P50750 SNRPGP20-201ENST00000604477 205 ntBASIC0.45□□□□□ -2.34
CDK9P50750 SCARNA4-201ENST00000629045 128 ntBASIC0.45□□□□□ -2.34
CDK9P50750 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
CDK9P50750 U3.8-201ENST00000363675 217 ntBASIC0.44□□□□□ -2.34
CDK9P50750 RNU6-1305P-201ENST00000364353 104 ntBASIC0.44□□□□□ -2.34
CDK9P50750 RNU6-1105P-201ENST00000384774 107 ntBASIC0.44□□□□□ -2.34
CDK9P50750 RNA5SP323-201ENST00000391094 133 ntBASIC0.44□□□□□ -2.34
CDK9P50750 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.44□□□□□ -2.34
CDK9P50750 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.44□□□□□ -2.34
CDK9P50750 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.44□□□□□ -2.34
CDK9P50750 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.44□□□□□ -2.34
CDK9P50750 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.44□□□□□ -2.34
CDK9P50750 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.44□□□□□ -2.34
CDK9P50750 MTND1P5-201ENST00000517906 940 ntBASIC0.44□□□□□ -2.34
CDK9P50750 AP003716.2-201ENST00000528260 108 ntBASIC0.44□□□□□ -2.34
CDK9P50750 MTND1P15-201ENST00000579262 949 ntBASIC0.44□□□□□ -2.34
CDK9P50750 CPDP1-201ENST00000579660 283 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms