Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC124312.5-201ENST00000604451 268 ntBASIC2.13□□□□□ -2.07
CLK1P49759 PRR13P7-201ENST00000605538 430 ntBASIC2.13□□□□□ -2.07
CLK1P49759 AC100812.1-201ENST00000607622 580 ntBASIC2.13□□□□□ -2.07
CLK1P49759 AL132822.1-201ENST00000617063 513 ntBASIC2.13□□□□□ -2.07
CLK1P49759 AL159153.1-201ENST00000619688 317 ntBASIC2.13□□□□□ -2.07
CLK1P49759 AC243829.7-201ENST00000633081 225 ntBASIC2.13□□□□□ -2.07
CLK1P49759 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CLK1P49759 Y_RNA.47-201ENST00000362697 108 ntBASIC2.12□□□□□ -2.07
CLK1P49759 Y_RNA.358-201ENST00000365491 99 ntBASIC2.12□□□□□ -2.07
CLK1P49759 Y_RNA.380-201ENST00000365663 111 ntBASIC2.12□□□□□ -2.07
CLK1P49759 Y_RNA.424-201ENST00000384063 103 ntBASIC2.12□□□□□ -2.07
CLK1P49759 SNORA67.4-201ENST00000384688 142 ntBASIC2.12□□□□□ -2.07
CLK1P49759 Y_RNA.574-201ENST00000384766 95 ntBASIC2.12□□□□□ -2.07
CLK1P49759 MIR487A-201ENST00000385009 80 ntBASIC2.12□□□□□ -2.07
CLK1P49759 RNA5SP213-201ENST00000391031 106 ntBASIC2.12□□□□□ -2.07
CLK1P49759 RNU11-3P-201ENST00000391111 133 ntBASIC2.12□□□□□ -2.07
CLK1P49759 DPH3P2-201ENST00000422618 250 ntBASIC2.12□□□□□ -2.07
CLK1P49759 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.12□□□□□ -2.07
CLK1P49759 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.12□□□□□ -2.07
CLK1P49759 RPL39P29-201ENST00000447779 157 ntBASIC2.12□□□□□ -2.07
CLK1P49759 AL353705.4-201ENST00000449661 238 ntBASIC2.12□□□□□ -2.07
CLK1P49759 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.12□□□□□ -2.07
CLK1P49759 PRELID3BP1-201ENST00000457142 540 ntBASIC2.12□□□□□ -2.07
CLK1P49759 TOMM22P6-201ENST00000465035 409 ntBASIC2.12□□□□□ -2.07
CLK1P49759 RPL30P12-201ENST00000474666 353 ntBASIC2.12□□□□□ -2.07
CLK1P49759 AC104564.1-201ENST00000493028 407 ntBASIC2.12□□□□□ -2.07
CLK1P49759 MRPS35P2-201ENST00000508242 191 ntBASIC2.12□□□□□ -2.07
CLK1P49759 RNU7-175P-201ENST00000515915 61 ntBASIC2.12□□□□□ -2.07
CLK1P49759 SNORA44.1-201ENST00000517031 108 ntBASIC2.12□□□□□ -2.07
CLK1P49759 AC131281.1-201ENST00000522984 164 ntBASIC2.12□□□□□ -2.07
CLK1P49759 HSPE1P4-201ENST00000550617 308 ntBASIC2.12□□□□□ -2.07
CLK1P49759 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.12□□□□□ -2.07
CLK1P49759 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.12□□□□□ -2.07
CLK1P49759 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.12□□□□□ -2.07
CLK1P49759 MIR4672-201ENST00000583126 81 ntBASIC2.12□□□□□ -2.07
CLK1P49759 RAC1P9-201ENST00000604990 392 ntBASIC2.12□□□□□ -2.07
CLK1P49759 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.12□□□□□ -2.07
CLK1P49759 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.12□□□□□ -2.07
CLK1P49759 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLK1P49759 AC069528.2-201ENST00000624849 1991 ntBASIC2.12□□□□□ -2.07
CLK1P49759 RNU6-222P-201ENST00000362438 107 ntBASIC2.11□□□□□ -2.07
CLK1P49759 Y_RNA.40-201ENST00000362645 93 ntBASIC2.11□□□□□ -2.07
CLK1P49759 RNU6-196P-201ENST00000384315 107 ntBASIC2.11□□□□□ -2.07
CLK1P49759 Y_RNA.504-201ENST00000384481 104 ntBASIC2.11□□□□□ -2.07
CLK1P49759 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLK1P49759 RNU6-1109P-201ENST00000391187 107 ntBASIC2.11□□□□□ -2.07
CLK1P49759 RPL21P1-201ENST00000399532 476 ntBASIC2.11□□□□□ -2.07
CLK1P49759 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.11□□□□□ -2.07
CLK1P49759 AC087477.1-201ENST00000465747 340 ntBASIC2.11□□□□□ -2.07
CLK1P49759 AC132942.1-201ENST00000486753 483 ntBASIC2.11□□□□□ -2.07
CLK1P49759 ANXA2P1-201ENST00000505539 926 ntBASIC2.11□□□□□ -2.07
CLK1P49759 Y_RNA.706-201ENST00000516933 99 ntBASIC2.11□□□□□ -2.07
CLK1P49759 AC018630.3-201ENST00000542637 96 ntBASIC2.11□□□□□ -2.07
CLK1P49759 AC007375.1-201ENST00000554513 578 ntBASIC2.11□□□□□ -2.07
CLK1P49759 RMST_6.1-201ENST00000611980 203 ntBASIC2.11□□□□□ -2.07
CLK1P49759 Y_RNA.149-201ENST00000363558 117 ntBASIC2.1□□□□□ -2.07
CLK1P49759 Y_RNA.210-201ENST00000364161 110 ntBASIC2.1□□□□□ -2.07
CLK1P49759 Y_RNA.452-201ENST00000384202 108 ntBASIC2.1□□□□□ -2.07
CLK1P49759 Y_RNA.512-201ENST00000384518 102 ntBASIC2.1□□□□□ -2.07
CLK1P49759 RNU6-130P-201ENST00000411112 103 ntBASIC2.1□□□□□ -2.07
CLK1P49759 AC009963.1-201ENST00000417265 157 ntBASIC2.1□□□□□ -2.07
CLK1P49759 RPL31P63-201ENST00000422565 375 ntBASIC2.1□□□□□ -2.07
CLK1P49759 AC078809.1-201ENST00000427601 140 ntBASIC2.1□□□□□ -2.07
CLK1P49759 AC244670.1-201ENST00000436879 112 ntBASIC2.1□□□□□ -2.07
CLK1P49759 AC073910.1-201ENST00000445047 438 ntBASIC2.1□□□□□ -2.07
CLK1P49759 FCF1P4-201ENST00000448326 183 ntBASIC2.1□□□□□ -2.07
CLK1P49759 SNRPGP7-201ENST00000469016 106 ntBASIC2.1□□□□□ -2.07
CLK1P49759 AC010469.2-201ENST00000496412 480 ntBASIC2.1□□□□□ -2.07
CLK1P49759 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.1□□□□□ -2.07
CLK1P49759 AC016632.1-201ENST00000503994 196 ntBASIC2.1□□□□□ -2.07
CLK1P49759 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.1□□□□□ -2.07
CLK1P49759 RNU6-635P-201ENST00000516651 102 ntBASIC2.1□□□□□ -2.07
CLK1P49759 SNORA31.16-201ENST00000516773 139 ntBASIC2.1□□□□□ -2.07
CLK1P49759 AC027288.2-201ENST00000553028 243 ntBASIC2.1□□□□□ -2.07
CLK1P49759 AL442163.3-201ENST00000554110 156 ntBASIC2.1□□□□□ -2.07
CLK1P49759 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.1□□□□□ -2.07
CLK1P49759 AC090517.1-201ENST00000569307 266 ntBASIC2.1□□□□□ -2.07
CLK1P49759 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.1□□□□□ -2.07
CLK1P49759 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.1□□□□□ -2.07
CLK1P49759 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
CLK1P49759 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CLK1P49759 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.09□□□□□ -2.07
CLK1P49759 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CLK1P49759 AC092268.1-201ENST00000342691 405 ntBASIC2.09□□□□□ -2.07
CLK1P49759 Y_RNA.193-201ENST00000363979 102 ntBASIC2.09□□□□□ -2.07
CLK1P49759 Y_RNA.214-201ENST00000364201 112 ntBASIC2.09□□□□□ -2.07
CLK1P49759 Y_RNA.276-201ENST00000364732 109 ntBASIC2.09□□□□□ -2.07
CLK1P49759 Y_RNA.551-201ENST00000384661 102 ntBASIC2.09□□□□□ -2.07
CLK1P49759 MIR32-201ENST00000384965 70 ntBASIC2.09□□□□□ -2.07
CLK1P49759 MTCO3P19-201ENST00000415864 321 ntBASIC2.09□□□□□ -2.07
CLK1P49759 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.09□□□□□ -2.07
CLK1P49759 AC114482.1-201ENST00000418010 247 ntBASIC2.09□□□□□ -2.07
CLK1P49759 ELOCP20-201ENST00000422460 345 ntBASIC2.09□□□□□ -2.07
CLK1P49759 HMGN2P3-201ENST00000433603 273 ntBASIC2.09□□□□□ -2.07
CLK1P49759 HMGN2P5-201ENST00000436882 273 ntBASIC2.09□□□□□ -2.07
CLK1P49759 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.09□□□□□ -2.07
CLK1P49759 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.09□□□□□ -2.07
CLK1P49759 MTCO3P8-201ENST00000453691 755 ntBASIC2.09□□□□□ -2.07
CLK1P49759 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.09□□□□□ -2.07
CLK1P49759 snoU13.6-201ENST00000458785 104 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms