Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 MIR7844-201ENST00000616161 122 ntBASIC0.23□□□□□ -2.37
SSR2P43308 U6.73-201ENST00000619194 103 ntBASIC0.23□□□□□ -2.37
SSR2P43308 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.23□□□□□ -2.37
SSR2P43308 AC139792.3-201ENST00000623525 224 ntBASIC0.23□□□□□ -2.37
SSR2P43308 AC007671.2-201ENST00000637344 619 ntBASIC0.23□□□□□ -2.37
SSR2P43308 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.23□□□□□ -2.37
SSR2P43308 MTND4P9-201ENST00000507819 1346 ntBASIC0.22□□□□□ -2.37
SSR2P43308 RNU6-1097P-201ENST00000363586 107 ntBASIC0.22□□□□□ -2.37
SSR2P43308 RNU6-108P-201ENST00000365558 107 ntBASIC0.22□□□□□ -2.37
SSR2P43308 RNU6-424P-201ENST00000384367 105 ntBASIC0.22□□□□□ -2.37
SSR2P43308 SNORD89-201ENST00000390981 114 ntBASIC0.22□□□□□ -2.37
SSR2P43308 Y_RNA.598-201ENST00000410480 95 ntBASIC0.22□□□□□ -2.37
SSR2P43308 AL008987.1-201ENST00000415528 237 ntBASIC0.22□□□□□ -2.37
SSR2P43308 AC098592.1-201ENST00000419352 333 ntBASIC0.22□□□□□ -2.37
SSR2P43308 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.22□□□□□ -2.37
SSR2P43308 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.22□□□□□ -2.37
SSR2P43308 MTCO2P7-201ENST00000446518 666 ntBASIC0.22□□□□□ -2.37
SSR2P43308 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.22□□□□□ -2.37
SSR2P43308 RPS20P10-201ENST00000451209 253 ntBASIC0.22□□□□□ -2.37
SSR2P43308 RPS29P15-201ENST00000458329 171 ntBASIC0.22□□□□□ -2.37
SSR2P43308 SCARNA18-201ENST00000459004 134 ntBASIC0.22□□□□□ -2.37
SSR2P43308 RNU7-94P-201ENST00000459576 63 ntBASIC0.22□□□□□ -2.37
SSR2P43308 RPS29P27-201ENST00000463711 170 ntBASIC0.22□□□□□ -2.37
SSR2P43308 GMFBP1-201ENST00000467831 427 ntBASIC0.22□□□□□ -2.37
SSR2P43308 SNRPGP20-201ENST00000604477 205 ntBASIC0.22□□□□□ -2.37
SSR2P43308 AL096861.1-201ENST00000610899 123 ntBASIC0.22□□□□□ -2.37
SSR2P43308 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
SSR2P43308 AL078596.1-201ENST00000624856 447 ntBASIC0.22□□□□□ -2.37
SSR2P43308 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
SSR2P43308 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
SSR2P43308 RNU6-227P-201ENST00000362865 103 ntBASIC0.21□□□□□ -2.38
SSR2P43308 MIR598-201ENST00000384868 97 ntBASIC0.21□□□□□ -2.38
SSR2P43308 RNU6-1186P-201ENST00000410429 97 ntBASIC0.21□□□□□ -2.38
SSR2P43308 RNA5SP494-201ENST00000410653 129 ntBASIC0.21□□□□□ -2.38
SSR2P43308 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.21□□□□□ -2.38
SSR2P43308 AC106883.1-201ENST00000418805 562 ntBASIC0.21□□□□□ -2.38
SSR2P43308 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.21□□□□□ -2.38
SSR2P43308 STAG3L5P-204ENST00000443759 179 ntBASIC0.21□□□□□ -2.38
SSR2P43308 AL009048.1-201ENST00000450437 298 ntBASIC0.21□□□□□ -2.38
SSR2P43308 RNU6-344P-201ENST00000516635 111 ntBASIC0.21□□□□□ -2.38
SSR2P43308 RNU6-612P-201ENST00000516909 102 ntBASIC0.21□□□□□ -2.38
SSR2P43308 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.21□□□□□ -2.38
SSR2P43308 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.21□□□□□ -2.38
SSR2P43308 RNU6-85P-201ENST00000605989 107 ntBASIC0.21□□□□□ -2.38
SSR2P43308 SNORA28-201ENST00000606769 126 ntBASIC0.21□□□□□ -2.38
SSR2P43308 AC068792.1-201ENST00000621354 417 ntBASIC0.21□□□□□ -2.38
SSR2P43308 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
SSR2P43308 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SSR2P43308 RNU6-1286P-201ENST00000383871 107 ntBASIC0.2□□□□□ -2.38
SSR2P43308 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
SSR2P43308 Y_RNA.508-201ENST00000384502 114 ntBASIC0.2□□□□□ -2.38
SSR2P43308 MIR1-2-201ENST00000384961 85 ntBASIC0.2□□□□□ -2.38
SSR2P43308 RNU1-119P-201ENST00000391122 165 ntBASIC0.2□□□□□ -2.38
SSR2P43308 U8.16-201ENST00000391279 133 ntBASIC0.2□□□□□ -2.38
SSR2P43308 RNA5SP504-201ENST00000410676 117 ntBASIC0.2□□□□□ -2.38
SSR2P43308 MTCO2P34-201ENST00000421994 607 ntBASIC0.2□□□□□ -2.38
SSR2P43308 MTCO2P12-201ENST00000427426 682 ntBASIC0.2□□□□□ -2.38
SSR2P43308 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.2□□□□□ -2.38
SSR2P43308 CALM2P4-201ENST00000430810 426 ntBASIC0.2□□□□□ -2.38
SSR2P43308 RPL23AP50-201ENST00000434149 455 ntBASIC0.2□□□□□ -2.38
SSR2P43308 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.2□□□□□ -2.38
SSR2P43308 LINC01399-202ENST00000458450 244 ntBASIC0.2□□□□□ -2.38
SSR2P43308 RNU7-167P-201ENST00000459160 62 ntBASIC0.2□□□□□ -2.38
SSR2P43308 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.2□□□□□ -2.38
SSR2P43308 RNA5SP134-201ENST00000516492 96 ntBASIC0.2□□□□□ -2.38
SSR2P43308 AC022868.1-201ENST00000517767 391 ntBASIC0.2□□□□□ -2.38
SSR2P43308 MTND2P32-201ENST00000521584 1038 ntBASIC0.2□□□□□ -2.38
SSR2P43308 SUB1P2-201ENST00000556401 297 ntBASIC0.2□□□□□ -2.38
SSR2P43308 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.2□□□□□ -2.38
SSR2P43308 AC131055.1-201ENST00000584626 316 ntBASIC0.2□□□□□ -2.38
SSR2P43308 AC004223.2-201ENST00000590309 544 ntBASIC0.2□□□□□ -2.38
SSR2P43308 Z83818.1-201ENST00000603584 150 ntBASIC0.2□□□□□ -2.38
SSR2P43308 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.2□□□□□ -2.38
SSR2P43308 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.2□□□□□ -2.38
SSR2P43308 MTND5P16-201ENST00000460269 1703 ntBASIC0.19□□□□□ -2.38
SSR2P43308 SNORD114-23-201ENST00000363536 72 ntBASIC0.19□□□□□ -2.38
SSR2P43308 RNY1-201ENST00000364228 113 ntBASIC0.19□□□□□ -2.38
SSR2P43308 Y_RNA.355-201ENST00000365462 98 ntBASIC0.19□□□□□ -2.38
SSR2P43308 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.19□□□□□ -2.38
SSR2P43308 RNA5SP511-201ENST00000410487 115 ntBASIC0.19□□□□□ -2.38
SSR2P43308 AC244098.3-201ENST00000424803 96 ntBASIC0.19□□□□□ -2.38
SSR2P43308 AL162725.1-201ENST00000435405 301 ntBASIC0.19□□□□□ -2.38
SSR2P43308 UBE2D3P4-201ENST00000441973 436 ntBASIC0.19□□□□□ -2.38
SSR2P43308 TPT1P7-201ENST00000458300 517 ntBASIC0.19□□□□□ -2.38
SSR2P43308 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.19□□□□□ -2.38
SSR2P43308 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.19□□□□□ -2.38
SSR2P43308 RPL39P5-202ENST00000512505 151 ntBASIC0.19□□□□□ -2.38
SSR2P43308 RNU6-1110P-201ENST00000516462 101 ntBASIC0.19□□□□□ -2.38
SSR2P43308 MTND4LP26-201ENST00000518144 282 ntBASIC0.19□□□□□ -2.38
SSR2P43308 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.19□□□□□ -2.38
SSR2P43308 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SSR2P43308 RNU6-1105P-201ENST00000384774 107 ntBASIC0.18□□□□□ -2.38
SSR2P43308 MIR513B-201ENST00000385136 84 ntBASIC0.18□□□□□ -2.38
SSR2P43308 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.18□□□□□ -2.38
SSR2P43308 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.18□□□□□ -2.38
SSR2P43308 DAP3P1-201ENST00000441522 278 ntBASIC0.18□□□□□ -2.38
SSR2P43308 MTCO1P19-201ENST00000443487 500 ntBASIC0.18□□□□□ -2.38
SSR2P43308 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.18□□□□□ -2.38
SSR2P43308 AC093850.1-201ENST00000454121 251 ntBASIC0.18□□□□□ -2.38
SSR2P43308 UBE2V1P12-201ENST00000503954 474 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms