Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TRIM23P36406 AC074085.1-201ENST00000413598 418 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 AC108667.1-201ENST00000428618 249 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 NDUFB4P10-201ENST00000452541 359 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 RPL30P10-201ENST00000488148 337 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 AC018710.1-201ENST00000506509 158 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 RNU7-175P-201ENST00000515915 61 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 RNU6-58P-201ENST00000517143 103 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM23P36406 AP003033.1-201ENST00000527244 415 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 RRN3P3-201ENST00000549207 578 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM23P36406 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM23P36406 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM23P36406 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 MIR6128-201ENST00000615528 109 ntBASIC1.6□□□□□ -2.15
TRIM23P36406 Y_RNA.248-201ENST00000364501 109 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 Y_RNA.279-201ENST00000364763 95 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 Y_RNA.319-201ENST00000365138 92 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 SNORA67.2-201ENST00000384300 149 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 RNA5SP100-201ENST00000410903 110 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 RNA5SP59-201ENST00000410922 110 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.59□□□□□ -2.15
TRIM23P36406 USMG5P1-201ENST00000425964 177 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 ATP5J2P3-201ENST00000451550 258 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM23P36406 Y_RNA.682-201ENST00000516457 100 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 RNU6-1016P-201ENST00000516689 94 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 RNU6-273P-201ENST00000516937 96 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 AC134698.4-201ENST00000523451 826 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 AL590705.4-201ENST00000532209 134 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 AC027288.2-201ENST00000553028 243 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.59□□□□□ -2.15
TRIM23P36406 AC018462.2-201ENST00000605375 395 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 AC022513.1-201ENST00000624512 117 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 AL159152.1-201ENST00000635019 2587 ntBASIC1.59□□□□□ -2.15
TRIM23P36406 ZNF204P-201ENST00000416749 2397 ntBASIC1.59□□□□□ -2.16
TRIM23P36406 Y_RNA.339-201ENST00000365325 102 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 RNU6-767P-201ENST00000384132 107 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 Y_RNA.482-201ENST00000384377 111 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 RNU6-306P-201ENST00000384617 107 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 MIR30A-201ENST00000385092 71 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRIM23P36406 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 AC004866.1-201ENST00000411748 78 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 MTND1P2-201ENST00000430604 821 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 Z82188.1-201ENST00000436709 154 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 AC107399.1-201ENST00000451226 265 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 RPL31P58-201ENST00000469001 379 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 HMGN2P9-201ENST00000476875 229 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 AC097473.1-201ENST00000508142 408 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.58□□□□□ -2.16
TRIM23P36406 AC016727.1-205ENST00000605437 569 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 SNORD11B-201ENST00000607707 90 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 MTND4P12-201ENST00000498999 1377 ntBASIC1.58□□□□□ -2.16
TRIM23P36406 RNU6-661P-201ENST00000362409 107 ntBASIC1.57□□□□□ -2.16
TRIM23P36406 RNU6-842P-201ENST00000384269 107 ntBASIC1.57□□□□□ -2.16
TRIM23P36406 RNU6-159P-201ENST00000391080 106 ntBASIC1.57□□□□□ -2.16
TRIM23P36406 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
TRIM23P36406 USP9YP30-201ENST00000430729 455 ntBASIC1.57□□□□□ -2.16
TRIM23P36406 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM23P36406 AC116353.2-201ENST00000505332 712 ntBASIC1.57□□□□□ -2.16
TRIM23P36406 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM23P36406 MIR5094-201ENST00000578766 85 ntBASIC1.57□□□□□ -2.16
TRIM23P36406 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
TRIM23P36406 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM23P36406 AC084782.3-201ENST00000612282 578 ntBASIC1.57□□□□□ -2.16
TRIM23P36406 AC083806.3-201ENST00000614016 455 ntBASIC1.57□□□□□ -2.16
TRIM23P36406 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM23P36406 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM23P36406 Y_RNA.140-201ENST00000363474 103 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 Y_RNA.533-201ENST00000384596 114 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 RNU6-541P-201ENST00000384709 110 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM23P36406 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM23P36406 FO393415.2-201ENST00000480085 343 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 AC026782.1-201ENST00000512952 449 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 RNU6-1146P-201ENST00000516282 102 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 SNORA31.17-201ENST00000516953 127 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 AL121579.1-201ENST00000555129 305 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 AC100812.1-201ENST00000607622 580 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
TRIM23P36406 AL133216.2-202ENST00000634512 349 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 AC068205.3-201ENST00000636385 468 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 CASC19-280ENST00000642102 1351 ntBASIC1.56□□□□□ -2.16
TRIM23P36406 RNU6-845P-201ENST00000362578 103 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 RNU6-60P-201ENST00000364792 103 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 Y_RNA.338-201ENST00000365320 114 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 RNU6-418P-201ENST00000384035 107 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 MIR515-2-201ENST00000384883 83 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 MIR515-1-201ENST00000384884 83 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 RNU4-62P-201ENST00000410125 130 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM23P36406 RPL21P111-201ENST00000418453 477 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms