Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC126177.8-201ENST00000618339 1015 ntBASIC2.03□□□□□ -2.08
CHMP24386 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CHMP24386 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHMP24386 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHMP24386 MTND4P1-201ENST00000457501 1466 ntBASIC2.02□□□□□ -2.09
CHMP24386 CENPCP1-201ENST00000533085 2578 ntBASIC2.02□□□□□ -2.09
CHMP24386 RNU6-874P-201ENST00000362390 105 ntBASIC2.02□□□□□ -2.09
CHMP24386 Y_RNA.364-201ENST00000365532 101 ntBASIC2.02□□□□□ -2.09
CHMP24386 Y_RNA.474-201ENST00000384341 102 ntBASIC2.02□□□□□ -2.09
CHMP24386 MIR548B-201ENST00000385247 97 ntBASIC2.02□□□□□ -2.09
CHMP24386 MIR1253-201ENST00000408273 105 ntBASIC2.02□□□□□ -2.09
CHMP24386 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.02□□□□□ -2.09
CHMP24386 HMGN2P34-201ENST00000437647 269 ntBASIC2.02□□□□□ -2.09
CHMP24386 AC096638.1-201ENST00000444678 216 ntBASIC2.02□□□□□ -2.09
CHMP24386 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.02□□□□□ -2.09
CHMP24386 AC010409.1-201ENST00000487382 476 ntBASIC2.02□□□□□ -2.09
CHMP24386 RPL17P19-201ENST00000489069 552 ntBASIC2.02□□□□□ -2.09
CHMP24386 APOOP3-201ENST00000536787 586 ntBASIC2.02□□□□□ -2.09
CHMP24386 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.02□□□□□ -2.09
CHMP24386 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.02□□□□□ -2.09
CHMP24386 AC009831.4-201ENST00000620744 325 ntBASIC2.02□□□□□ -2.09
CHMP24386 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.02□□□□□ -2.09
CHMP24386 MTND5P6-201ENST00000422338 1798 ntBASIC2.02□□□□□ -2.09
CHMP24386 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
CHMP24386 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CHMP24386 MTND5P35-201ENST00000557537 1720 ntBASIC2.01□□□□□ -2.09
CHMP24386 RNU6-1188P-201ENST00000363795 107 ntBASIC2.01□□□□□ -2.09
CHMP24386 Y_RNA.303-201ENST00000364998 94 ntBASIC2.01□□□□□ -2.09
CHMP24386 RNU6-281P-201ENST00000384212 103 ntBASIC2.01□□□□□ -2.09
CHMP24386 MIR221-201ENST00000385135 110 ntBASIC2.01□□□□□ -2.09
CHMP24386 SNORA48.3-201ENST00000391081 134 ntBASIC2.01□□□□□ -2.09
CHMP24386 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CHMP24386 Y_RNA.646-201ENST00000410980 101 ntBASIC2.01□□□□□ -2.09
CHMP24386 AC010095.1-201ENST00000443543 144 ntBASIC2.01□□□□□ -2.09
CHMP24386 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.01□□□□□ -2.09
CHMP24386 Y_RNA.683-201ENST00000516508 93 ntBASIC2.01□□□□□ -2.09
CHMP24386 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.01□□□□□ -2.09
CHMP24386 AC022254.1-201ENST00000567857 235 ntBASIC2.01□□□□□ -2.09
CHMP24386 AC090617.3-201ENST00000573670 475 ntBASIC2.01□□□□□ -2.09
CHMP24386 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.01□□□□□ -2.09
CHMP24386 MIR1244-1-201ENST00000612829 85 ntBASIC2.01□□□□□ -2.09
CHMP24386 MIR1244-3-201ENST00000635744 85 ntBASIC2.01□□□□□ -2.09
CHMP24386 MIR1244-2-201ENST00000636449 85 ntBASIC2.01□□□□□ -2.09
CHMP24386 MIR1244-4-202ENST00000636813 85 ntBASIC2.01□□□□□ -2.09
CHMP24386 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CHMP24386 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2□□□□□ -2.09
CHMP24386 U3.8-201ENST00000363675 217 ntBASIC2□□□□□ -2.09
CHMP24386 RNU6-99P-201ENST00000364721 107 ntBASIC2□□□□□ -2.09
CHMP24386 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
CHMP24386 RNU6-310P-201ENST00000384655 107 ntBASIC2□□□□□ -2.09
CHMP24386 RNU6-1001P-201ENST00000411265 100 ntBASIC2□□□□□ -2.09
CHMP24386 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2□□□□□ -2.09
CHMP24386 AL121890.1-201ENST00000435457 205 ntBASIC2□□□□□ -2.09
CHMP24386 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2□□□□□ -2.09
CHMP24386 RPL30P15-201ENST00000457129 321 ntBASIC2□□□□□ -2.09
CHMP24386 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
CHMP24386 TRAPPC2P7-201ENST00000509650 231 ntBASIC2□□□□□ -2.09
CHMP24386 RNU6-1146P-201ENST00000516282 102 ntBASIC2□□□□□ -2.09
CHMP24386 RNU6-107P-201ENST00000516643 102 ntBASIC2□□□□□ -2.09
CHMP24386 SNORA31.17-201ENST00000516953 127 ntBASIC2□□□□□ -2.09
CHMP24386 RNU6-264P-201ENST00000517134 104 ntBASIC2□□□□□ -2.09
CHMP24386 IGKV3-31-201ENST00000523109 329 ntBASIC2□□□□□ -2.09
CHMP24386 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2□□□□□ -2.09
CHMP24386 MIR548S-201ENST00000581352 82 ntBASIC2□□□□□ -2.09
CHMP24386 AL353149.1-201ENST00000610667 244 ntBASIC2□□□□□ -2.09
CHMP24386 MIR1302-1-201ENST00000637932 143 ntBASIC2□□□□□ -2.09
CHMP24386 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CHMP24386 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CHMP24386 snoU2-30.2-201ENST00000362805 70 ntBASIC1.99□□□□□ -2.09
CHMP24386 RNU6-112P-201ENST00000363599 104 ntBASIC1.99□□□□□ -2.09
CHMP24386 RNU6-879P-201ENST00000364328 108 ntBASIC1.99□□□□□ -2.09
CHMP24386 Y_RNA.358-201ENST00000365491 99 ntBASIC1.99□□□□□ -2.09
CHMP24386 RNU6-1297P-201ENST00000384415 104 ntBASIC1.99□□□□□ -2.09
CHMP24386 AL117342.1-201ENST00000404861 406 ntBASIC1.99□□□□□ -2.09
CHMP24386 AC008134.1-201ENST00000420943 193 ntBASIC1.99□□□□□ -2.09
CHMP24386 EIF1P2-201ENST00000428233 350 ntBASIC1.99□□□□□ -2.09
CHMP24386 RPL23AP7-203ENST00000449021 469 ntBASIC1.99□□□□□ -2.09
CHMP24386 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.99□□□□□ -2.09
CHMP24386 RNU6-221P-201ENST00000459541 99 ntBASIC1.99□□□□□ -2.09
CHMP24386 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.99□□□□□ -2.09
CHMP24386 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.99□□□□□ -2.09
CHMP24386 RNU6-120P-201ENST00000516077 103 ntBASIC1.99□□□□□ -2.09
CHMP24386 AC022868.1-201ENST00000517767 391 ntBASIC1.99□□□□□ -2.09
CHMP24386 FRG2DP-202ENST00000566967 323 ntBASIC1.99□□□□□ -2.09
CHMP24386 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.99□□□□□ -2.09
CHMP24386 AC125232.2-201ENST00000592457 143 ntBASIC1.99□□□□□ -2.09
CHMP24386 MIR338-201ENST00000636369 67 ntBASIC1.99□□□□□ -2.09
CHMP24386 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CHMP24386 Y_RNA.557-201ENST00000384680 107 ntBASIC1.98□□□□□ -2.09
CHMP24386 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CHMP24386 SNORA75.6-201ENST00000391318 127 ntBASIC1.98□□□□□ -2.09
CHMP24386 RNU2-7P-201ENST00000410794 178 ntBASIC1.98□□□□□ -2.09
CHMP24386 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.98□□□□□ -2.09
CHMP24386 CST2P1-201ENST00000425770 87 ntBASIC1.98□□□□□ -2.09
CHMP24386 UBE2V1P7-201ENST00000446395 340 ntBASIC1.98□□□□□ -2.09
CHMP24386 AL021397.1-201ENST00000451806 248 ntBASIC1.98□□□□□ -2.09
CHMP24386 NDUFB4P10-201ENST00000452541 359 ntBASIC1.98□□□□□ -2.09
CHMP24386 Y_RNA.653-201ENST00000459091 95 ntBASIC1.98□□□□□ -2.09
CHMP24386 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
CHMP24386 RPS29P21-201ENST00000496272 170 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms