Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 U3.8-201ENST00000363675 217 ntBASIC1.14□□□□□ -2.23
NCK1P16333 RNU5F-3P-201ENST00000363767 117 ntBASIC1.14□□□□□ -2.23
NCK1P16333 Y_RNA.409-201ENST00000383990 98 ntBASIC1.14□□□□□ -2.23
NCK1P16333 RNU6-417P-201ENST00000384712 107 ntBASIC1.14□□□□□ -2.23
NCK1P16333 MIR513A1-201ENST00000385138 129 ntBASIC1.14□□□□□ -2.23
NCK1P16333 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
NCK1P16333 AF228730.1-201ENST00000397972 663 ntBASIC1.14□□□□□ -2.23
NCK1P16333 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
NCK1P16333 RNU2-66P-201ENST00000410650 161 ntBASIC1.14□□□□□ -2.23
NCK1P16333 RNU6-57P-201ENST00000411348 103 ntBASIC1.14□□□□□ -2.23
NCK1P16333 AC016909.1-201ENST00000415916 166 ntBASIC1.14□□□□□ -2.23
NCK1P16333 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.14□□□□□ -2.23
NCK1P16333 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.14□□□□□ -2.23
NCK1P16333 MTND1P26-201ENST00000440488 538 ntBASIC1.14□□□□□ -2.23
NCK1P16333 PGBD4P5-201ENST00000445958 426 ntBASIC1.14□□□□□ -2.23
NCK1P16333 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.14□□□□□ -2.23
NCK1P16333 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.14□□□□□ -2.23
NCK1P16333 RNU1-142P-201ENST00000516682 145 ntBASIC1.14□□□□□ -2.23
NCK1P16333 RNU1-92P-201ENST00000517017 135 ntBASIC1.14□□□□□ -2.23
NCK1P16333 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.14□□□□□ -2.23
NCK1P16333 MTND3P12-201ENST00000559068 328 ntBASIC1.14□□□□□ -2.23
NCK1P16333 MIR4781-201ENST00000585250 76 ntBASIC1.14□□□□□ -2.23
NCK1P16333 AL355802.3-201ENST00000607571 545 ntBASIC1.14□□□□□ -2.23
NCK1P16333 DISC2.1-201ENST00000612827 205 ntBASIC1.14□□□□□ -2.23
NCK1P16333 AL359075.3-201ENST00000613288 217 ntBASIC1.14□□□□□ -2.23
NCK1P16333 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.14□□□□□ -2.23
NCK1P16333 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.14□□□□□ -2.23
NCK1P16333 ZNF209P-201ENST00000593450 2304 ntBASIC1.14□□□□□ -2.23
NCK1P16333 ZNF204P-201ENST00000416749 2397 ntBASIC1.13□□□□□ -2.23
NCK1P16333 SNORA4.2-201ENST00000365313 147 ntBASIC1.13□□□□□ -2.23
NCK1P16333 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
NCK1P16333 RPL21P1-201ENST00000399532 476 ntBASIC1.13□□□□□ -2.23
NCK1P16333 BTF3P4-201ENST00000418852 495 ntBASIC1.13□□□□□ -2.23
NCK1P16333 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.13□□□□□ -2.23
NCK1P16333 RPS27P1-201ENST00000450552 247 ntBASIC1.13□□□□□ -2.23
NCK1P16333 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.13□□□□□ -2.23
NCK1P16333 AL163195.1-201ENST00000496941 348 ntBASIC1.13□□□□□ -2.23
NCK1P16333 AC107401.1-201ENST00000503426 685 ntBASIC1.13□□□□□ -2.23
NCK1P16333 AC019176.1-201ENST00000518519 225 ntBASIC1.13□□□□□ -2.23
NCK1P16333 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.13□□□□□ -2.23
NCK1P16333 AC004584.2-201ENST00000570407 410 ntBASIC1.13□□□□□ -2.23
NCK1P16333 AC010620.1-201ENST00000601088 1102 ntBASIC1.13□□□□□ -2.23
NCK1P16333 AC146944.4-201ENST00000602697 718 ntBASIC1.13□□□□□ -2.23
NCK1P16333 AL162413.1-201ENST00000603198 110 ntBASIC1.13□□□□□ -2.23
NCK1P16333 AL359821.1-201ENST00000605519 182 ntBASIC1.13□□□□□ -2.23
NCK1P16333 Z99129.1-201ENST00000612510 255 ntBASIC1.13□□□□□ -2.23
NCK1P16333 AC040896.1-201ENST00000613819 479 ntBASIC1.13□□□□□ -2.23
NCK1P16333 MIR8065-201ENST00000620577 100 ntBASIC1.13□□□□□ -2.23
NCK1P16333 AC006001.4-201ENST00000622243 395 ntBASIC1.13□□□□□ -2.23
NCK1P16333 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.13□□□□□ -2.23
NCK1P16333 AP000568.1-201ENST00000282964 442 ntBASIC1.12□□□□□ -2.23
NCK1P16333 RNA5SP323-201ENST00000391094 133 ntBASIC1.12□□□□□ -2.23
NCK1P16333 RNA5SP504-201ENST00000410676 117 ntBASIC1.12□□□□□ -2.23
NCK1P16333 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.12□□□□□ -2.23
NCK1P16333 ZNF885P-201ENST00000420174 1098 ntBASIC1.12□□□□□ -2.23
NCK1P16333 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.12□□□□□ -2.23
NCK1P16333 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.12□□□□□ -2.23
NCK1P16333 MTATP6P17-201ENST00000431030 672 ntBASIC1.12□□□□□ -2.23
NCK1P16333 RPL31P58-201ENST00000469001 379 ntBASIC1.12□□□□□ -2.23
NCK1P16333 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.12□□□□□ -2.23
NCK1P16333 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
NCK1P16333 MTCO2P30-201ENST00000503662 364 ntBASIC1.12□□□□□ -2.23
NCK1P16333 AC019235.1-201ENST00000503847 207 ntBASIC1.12□□□□□ -2.23
NCK1P16333 TRMT112P2-201ENST00000512910 132 ntBASIC1.12□□□□□ -2.23
NCK1P16333 RNU6-58P-201ENST00000517143 103 ntBASIC1.12□□□□□ -2.23
NCK1P16333 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.12□□□□□ -2.23
NCK1P16333 AL512360.1-201ENST00000555346 234 ntBASIC1.12□□□□□ -2.23
NCK1P16333 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.12□□□□□ -2.23
NCK1P16333 MIR3664-201ENST00000579074 99 ntBASIC1.12□□□□□ -2.23
NCK1P16333 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
NCK1P16333 NBR2-204ENST00000587322 63 ntBASIC1.12□□□□□ -2.23
NCK1P16333 MZT1P2-201ENST00000604387 248 ntBASIC1.12□□□□□ -2.23
NCK1P16333 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.12□□□□□ -2.23
NCK1P16333 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.12□□□□□ -2.23
NCK1P16333 U6.108-201ENST00000637764 58 ntBASIC1.12□□□□□ -2.23
NCK1P16333 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
NCK1P16333 SNORA33-201ENST00000363664 130 ntBASIC1.11□□□□□ -2.23
NCK1P16333 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
NCK1P16333 Y_RNA.530-201ENST00000384587 101 ntBASIC1.11□□□□□ -2.23
NCK1P16333 RNU6-331P-201ENST00000384724 107 ntBASIC1.11□□□□□ -2.23
NCK1P16333 MIR153-2-201ENST00000385225 87 ntBASIC1.11□□□□□ -2.23
NCK1P16333 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
NCK1P16333 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.11□□□□□ -2.23
NCK1P16333 MIR1185-2-201ENST00000408687 86 ntBASIC1.11□□□□□ -2.23
NCK1P16333 RN7SKP200-201ENST00000410564 320 ntBASIC1.11□□□□□ -2.23
NCK1P16333 RPL37P10-201ENST00000412884 288 ntBASIC1.11□□□□□ -2.23
NCK1P16333 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.11□□□□□ -2.23
NCK1P16333 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.11□□□□□ -2.23
NCK1P16333 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.11□□□□□ -2.23
NCK1P16333 RPL39P38-201ENST00000467018 153 ntBASIC1.11□□□□□ -2.23
NCK1P16333 CYP3A52P-201ENST00000563326 91 ntBASIC1.11□□□□□ -2.23
NCK1P16333 AC022432.1-201ENST00000595739 310 ntBASIC1.11□□□□□ -2.23
NCK1P16333 AL162424.1-201ENST00000602325 221 ntBASIC1.11□□□□□ -2.23
NCK1P16333 AC009033.1-201ENST00000624279 431 ntBASIC1.11□□□□□ -2.23
NCK1P16333 AC068137.4-201ENST00000638485 296 ntBASIC1.11□□□□□ -2.23
NCK1P16333 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
NCK1P16333 AL391987.6-201ENST00000305671 199 ntBASIC1.1□□□□□ -2.23
NCK1P16333 Y_RNA.372-201ENST00000365599 102 ntBASIC1.1□□□□□ -2.23
NCK1P16333 RNU6-1031P-201ENST00000384773 107 ntBASIC1.1□□□□□ -2.23
NCK1P16333 SNORA17.3-201ENST00000391159 129 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms