Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.02□□□□□ -2.41
TPRP12270 AC008752.3-201ENST00000588113 712 ntBASIC0.02□□□□□ -2.41
TPRP12270 AC064872.1-201ENST00000604823 1072 ntBASIC0.02□□□□□ -2.41
TPRP12270 BCRP9-201ENST00000605312 388 ntBASIC0.02□□□□□ -2.41
TPRP12270 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.02□□□□□ -2.41
TPRP12270 AL360219.1-201ENST00000610230 366 ntBASIC0.02□□□□□ -2.41
TPRP12270 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.02□□□□□ -2.41
TPRP12270 uc_338.11-201ENST00000619132 160 ntBASIC0.02□□□□□ -2.41
TPRP12270 AC139792.3-201ENST00000623525 224 ntBASIC0.02□□□□□ -2.41
TPRP12270 AC019226.2-201ENST00000625973 424 ntBASIC0.02□□□□□ -2.41
TPRP12270 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
TPRP12270 MIRLET7C-201ENST00000362160 84 ntBASIC0.01□□□□□ -2.41
TPRP12270 Y_RNA.265-201ENST00000364677 108 ntBASIC0.01□□□□□ -2.41
TPRP12270 Y_RNA.468-201ENST00000384298 102 ntBASIC0.01□□□□□ -2.41
TPRP12270 RNU6-378P-201ENST00000384324 107 ntBASIC0.01□□□□□ -2.41
TPRP12270 SNORA2B-201ENST00000384583 137 ntBASIC0.01□□□□□ -2.41
TPRP12270 MIR573-201ENST00000384964 99 ntBASIC0.01□□□□□ -2.41
TPRP12270 MIR891A-201ENST00000401237 79 ntBASIC0.01□□□□□ -2.41
TPRP12270 RNA5SP222-201ENST00000411039 105 ntBASIC0.01□□□□□ -2.41
TPRP12270 HMGN2P22-201ENST00000427588 175 ntBASIC0.01□□□□□ -2.41
TPRP12270 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.01□□□□□ -2.41
TPRP12270 AC073910.1-201ENST00000445047 438 ntBASIC0.01□□□□□ -2.41
TPRP12270 AC098869.1-201ENST00000481627 292 ntBASIC0.01□□□□□ -2.41
TPRP12270 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.01□□□□□ -2.41
TPRP12270 RNU6-782P-201ENST00000516852 104 ntBASIC0.01□□□□□ -2.41
TPRP12270 AF235103.2-201ENST00000525753 346 ntBASIC0.01□□□□□ -2.41
TPRP12270 AC009712.1-201ENST00000564938 316 ntBASIC0.01□□□□□ -2.41
TPRP12270 MIR3118-1-201ENST00000581787 76 ntBASIC0.01□□□□□ -2.41
TPRP12270 MIR548AC-201ENST00000585049 88 ntBASIC0.01□□□□□ -2.41
TPRP12270 AP001542.1-201ENST00000591314 200 ntBASIC0.01□□□□□ -2.41
TPRP12270 AL390123.1-201ENST00000603216 237 ntBASIC0.01□□□□□ -2.41
TPRP12270 RPL17P51-201ENST00000605218 238 ntBASIC0.01□□□□□ -2.41
TPRP12270 AC064807.4-201ENST00000607201 407 ntBASIC0.01□□□□□ -2.41
TPRP12270 RNU6-94P-201ENST00000607728 107 ntBASIC0.01□□□□□ -2.41
TPRP12270 AL512506.1-201ENST00000613918 449 ntBASIC0.01□□□□□ -2.41
TPRP12270 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.01□□□□□ -2.41
TPRP12270 snoZ196.1-201ENST00000625269 89 ntBASIC0.01□□□□□ -2.41
TPRP12270 AC134026.1-201ENST00000623249 2239 ntBASIC0.01□□□□□ -2.41
TPRP12270 RNU6-545P-201ENST00000362681 104 ntBASIC0.01□□□□□ -2.41
TPRP12270 RNU6-199P-201ENST00000362954 107 ntBASIC0.01□□□□□ -2.41
TPRP12270 RNA5SP323-201ENST00000391094 133 ntBASIC0.01□□□□□ -2.41
TPRP12270 SNORD115.1-201ENST00000391109 76 ntBASIC0.01□□□□□ -2.41
TPRP12270 AC002486.1-201ENST00000435098 391 ntBASIC0.01□□□□□ -2.41
TPRP12270 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.01□□□□□ -2.41
TPRP12270 U7.7-201ENST00000459276 60 ntBASIC0.01□□□□□ -2.41
TPRP12270 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.01□□□□□ -2.41
TPRP12270 OR9P1P-201ENST00000496431 281 ntBASIC0.01□□□□□ -2.41
TPRP12270 HMGB1P29-201ENST00000505659 499 ntBASIC0.01□□□□□ -2.41
TPRP12270 AC116353.3-201ENST00000511215 249 ntBASIC0.01□□□□□ -2.41
TPRP12270 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.01□□□□□ -2.41
TPRP12270 RNU6-948P-201ENST00000516374 107 ntBASIC0.01□□□□□ -2.41
TPRP12270 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.01□□□□□ -2.41
TPRP12270 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.01□□□□□ -2.41
TPRP12270 AC010376.1-201ENST00000522101 334 ntBASIC0.01□□□□□ -2.41
TPRP12270 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.01□□□□□ -2.41
TPRP12270 AC115990.1-201ENST00000526957 301 ntBASIC0.01□□□□□ -2.41
TPRP12270 AL391840.1-201ENST00000571144 367 ntBASIC0.01□□□□□ -2.41
TPRP12270 AL356157.2-201ENST00000605122 111 ntBASIC0.01□□□□□ -2.41
TPRP12270 SNORA25.18-201ENST00000607153 114 ntBASIC0.01□□□□□ -2.41
TPRP12270 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.01□□□□□ -2.41
TPRP12270 MIR4315-1-201ENST00000636800 73 ntBASIC0.01□□□□□ -2.41
TPRP12270 MIR4315-2-201ENST00000640925 73 ntBASIC0.01□□□□□ -2.41
TPRP12270 MTND4P4-201ENST00000439033 1366 ntBASIC0□□□□□ -2.41
TPRP12270 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
TPRP12270 Y_RNA.65-201ENST00000362846 100 ntBASIC0□□□□□ -2.41
TPRP12270 RNU6-534P-201ENST00000364877 106 ntBASIC0□□□□□ -2.41
TPRP12270 SNORA80D-201ENST00000384488 135 ntBASIC0□□□□□ -2.41
TPRP12270 MIR300-201ENST00000401138 83 ntBASIC0□□□□□ -2.41
TPRP12270 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0□□□□□ -2.41
TPRP12270 AC078809.1-201ENST00000427601 140 ntBASIC0□□□□□ -2.41
TPRP12270 TIMM9P3-201ENST00000428659 274 ntBASIC0□□□□□ -2.41
TPRP12270 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0□□□□□ -2.41
TPRP12270 AL445523.1-201ENST00000451184 1362 ntBASIC0□□□□□ -2.41
TPRP12270 USP9YP25-201ENST00000457708 443 ntBASIC0□□□□□ -2.41
TPRP12270 RNU7-57P-201ENST00000459540 60 ntBASIC0□□□□□ -2.41
TPRP12270 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0□□□□□ -2.41
TPRP12270 AC104982.1-201ENST00000478775 574 ntBASIC0□□□□□ -2.41
TPRP12270 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0□□□□□ -2.41
TPRP12270 AC010587.1-201ENST00000505809 469 ntBASIC0□□□□□ -2.41
TPRP12270 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0□□□□□ -2.41
TPRP12270 RNU6-123P-201ENST00000516163 102 ntBASIC0□□□□□ -2.41
TPRP12270 RNU1-142P-201ENST00000516682 145 ntBASIC0□□□□□ -2.41
TPRP12270 RNA5SP454-201ENST00000517231 127 ntBASIC0□□□□□ -2.41
TPRP12270 AC105185.1-201ENST00000518705 535 ntBASIC0□□□□□ -2.41
TPRP12270 AC016256.1-201ENST00000547971 354 ntBASIC0□□□□□ -2.41
TPRP12270 AC123904.2-201ENST00000548059 300 ntBASIC0□□□□□ -2.41
TPRP12270 AC022523.2-201ENST00000561045 150 ntBASIC0□□□□□ -2.41
TPRP12270 AC131055.1-201ENST00000584626 316 ntBASIC0□□□□□ -2.41
TPRP12270 AL357312.1-201ENST00000603879 298 ntBASIC0□□□□□ -2.41
TPRP12270 AL139418.1-201ENST00000613613 177 ntBASIC0□□□□□ -2.41
TPRP12270 AL078595.3-201ENST00000623815 1166 ntBASIC0□□□□□ -2.41
TPRP12270 RNA5SP264-201ENST00000363115 107 ntBASIC-0.01□□□□□ -2.41
TPRP12270 SNORA42.1-201ENST00000363515 137 ntBASIC-0.01□□□□□ -2.41
TPRP12270 RNY4P16-201ENST00000364768 94 ntBASIC-0.01□□□□□ -2.41
TPRP12270 RNU6-929P-201ENST00000384429 107 ntBASIC-0.01□□□□□ -2.41
TPRP12270 RNU6-417P-201ENST00000384712 107 ntBASIC-0.01□□□□□ -2.41
TPRP12270 MIR520F-201ENST00000384824 87 ntBASIC-0.01□□□□□ -2.41
TPRP12270 SNORD41-201ENST00000386967 70 ntBASIC-0.01□□□□□ -2.41
TPRP12270 SNORD12-201ENST00000391002 90 ntBASIC-0.01□□□□□ -2.41
TPRP12270 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms