Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL133216.2-202ENST00000634512 349 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SFTPBP07988 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 snoU2-30.2-201ENST00000362805 70 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 RNU1-17P-201ENST00000363022 152 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 SNORD87-201ENST00000364849 89 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
SFTPBP07988 RNU6-17P-201ENST00000384245 107 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 RNU6-842P-201ENST00000384269 107 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 Y_RNA.473-201ENST00000384333 102 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 RNU6-18P-201ENST00000384527 107 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 MIR548B-201ENST00000385247 97 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.54□□□□□ -2.16
SFTPBP07988 RNU6-174P-201ENST00000410406 106 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 RNA5SP247-201ENST00000411181 105 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 FCF1P9-201ENST00000412546 282 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.54□□□□□ -2.16
SFTPBP07988 HMGN1P13-201ENST00000505795 138 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 AC025465.3-201ENST00000510570 311 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 RNU6-1198P-201ENST00000516904 67 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.54□□□□□ -2.16
SFTPBP07988 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.54□□□□□ -2.16
SFTPBP07988 MIR4419B-201ENST00000577260 68 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 AC084782.3-201ENST00000612282 578 ntBASIC1.54□□□□□ -2.16
SFTPBP07988 RNU6-414P-201ENST00000363705 104 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 Y_RNA.238-201ENST00000364441 102 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 RNU6-338P-201ENST00000383888 105 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 Y_RNA.405-201ENST00000383979 100 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 Y_RNA.451-201ENST00000384200 100 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 Y_RNA.524-201ENST00000384564 100 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 Y_RNA.561-201ENST00000384694 100 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 AL356776.1-201ENST00000406574 447 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 RPS20P15-201ENST00000412792 311 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 AC016909.1-201ENST00000415916 166 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 AC007098.1-201ENST00000420122 367 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 CYCSP49-201ENST00000420810 319 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 AL139396.1-201ENST00000421137 167 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 EIF1P1-201ENST00000421436 341 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 CST2P1-201ENST00000425770 87 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 RNU6-329P-201ENST00000459618 107 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 RPS29P11-201ENST00000496507 171 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 MTND4P12-201ENST00000498999 1377 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 AC107393.1-201ENST00000512403 346 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 CBX3P4-201ENST00000538909 354 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.53□□□□□ -2.16
SFTPBP07988 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 MIR4742-201ENST00000581069 85 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SFTPBP07988 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
SFTPBP07988 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.53□□□□□ -2.16
SFTPBP07988 7SK.7-201ENST00000603504 247 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 snoZ196.1-201ENST00000625269 89 ntBASIC1.53□□□□□ -2.16
SFTPBP07988 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.53□□□□□ -2.16
SFTPBP07988 ZNF299P-201ENST00000406845 1804 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 Y_RNA.164-201ENST00000363709 102 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 RNU6-596P-201ENST00000365395 98 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 Y_RNA.415-201ENST00000384012 112 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 RNU6-417P-201ENST00000384712 107 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 MIR934-201ENST00000401241 83 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 MIR1253-201ENST00000408273 105 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.52□□□□□ -2.17
SFTPBP07988 AP000870.1-201ENST00000472927 406 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 AC091179.3-201ENST00000474761 144 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 MTND5P5-201ENST00000503764 376 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 RNU7-175P-201ENST00000515915 61 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 RNU6-1053P-201ENST00000515930 101 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 AF235103.2-201ENST00000525753 346 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 AL590705.4-201ENST00000532209 134 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 MIR3618-201ENST00000580330 88 ntBASIC1.52□□□□□ -2.17
SFTPBP07988 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.52□□□□□ -2.17
SFTPBP07988 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.52□□□□□ -2.17
SFTPBP07988 SNORA63D-201ENST00000364359 132 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 Y_RNA.287-201ENST00000364853 94 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 SNORD48-201ENST00000364953 64 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 MIR9-3-201ENST00000385084 90 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 RNU6-159P-201ENST00000391080 106 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 MIR1267-201ENST00000408723 78 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 Y_RNA.595-201ENST00000410403 105 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 EBAG9P1-201ENST00000418955 543 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.51□□□□□ -2.17
SFTPBP07988 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.51□□□□□ -2.17
SFTPBP07988 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.51□□□□□ -2.17
SFTPBP07988 SNORD5.1-201ENST00000458800 75 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 RPL26P26-201ENST00000480251 434 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 RPL36AP21-201ENST00000490372 323 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.51□□□□□ -2.17
SFTPBP07988 SNORA25.15-201ENST00000516487 89 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 AC134698.4-201ENST00000523451 826 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 CBX3P8-201ENST00000532412 525 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.51□□□□□ -2.17
SFTPBP07988 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.51□□□□□ -2.17
SFTPBP07988 MIR8081-201ENST00000611533 95 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.51□□□□□ -2.17
SFTPBP07988 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SFTPBP07988 MIR337-201ENST00000362281 93 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 RNU6-222P-201ENST00000362438 107 ntBASIC1.5□□□□□ -2.17
SFTPBP07988 RNU1-62P-201ENST00000362599 164 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms