Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC137590.2-201ENST00000619709 240 ntBASIC1.09□□□□□ -2.23
CD74P04233 AC006001.4-201ENST00000622243 395 ntBASIC1.09□□□□□ -2.23
CD74P04233 AC100810.6-201ENST00000638068 285 ntBASIC1.09□□□□□ -2.23
CD74P04233 BX322639.1-202ENST00000423987 2213 ntBASIC1.09□□□□□ -2.24
CD74P04233 AC010615.1-201ENST00000594254 1764 ntBASIC1.08□□□□□ -2.24
CD74P04233 MIR337-201ENST00000362281 93 ntBASIC1.08□□□□□ -2.24
CD74P04233 Y_RNA.3-201ENST00000362331 103 ntBASIC1.08□□□□□ -2.24
CD74P04233 Y_RNA.100-201ENST00000363141 102 ntBASIC1.08□□□□□ -2.24
CD74P04233 SNORA25.8-201ENST00000364831 128 ntBASIC1.08□□□□□ -2.24
CD74P04233 RNU4-12P-201ENST00000365233 139 ntBASIC1.08□□□□□ -2.24
CD74P04233 RNU6-306P-201ENST00000384617 107 ntBASIC1.08□□□□□ -2.24
CD74P04233 MIR520A-201ENST00000384862 85 ntBASIC1.08□□□□□ -2.24
CD74P04233 MIR32-201ENST00000384965 70 ntBASIC1.08□□□□□ -2.24
CD74P04233 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
CD74P04233 MIR320B2-201ENST00000408479 138 ntBASIC1.08□□□□□ -2.24
CD74P04233 AC245047.4-201ENST00000433189 144 ntBASIC1.08□□□□□ -2.24
CD74P04233 UBE2V1P8-201ENST00000437166 265 ntBASIC1.08□□□□□ -2.24
CD74P04233 AC079354.2-201ENST00000453523 154 ntBASIC1.08□□□□□ -2.24
CD74P04233 RNU7-66P-201ENST00000459469 62 ntBASIC1.08□□□□□ -2.24
CD74P04233 RPS26P55-201ENST00000471178 356 ntBASIC1.08□□□□□ -2.24
CD74P04233 HMGN2P9-201ENST00000476875 229 ntBASIC1.08□□□□□ -2.24
CD74P04233 RPL30P7-201ENST00000479312 323 ntBASIC1.08□□□□□ -2.24
CD74P04233 RPL36AP21-201ENST00000490372 323 ntBASIC1.08□□□□□ -2.24
CD74P04233 MTCO2P30-201ENST00000503662 364 ntBASIC1.08□□□□□ -2.24
CD74P04233 RNU6-948P-201ENST00000516374 107 ntBASIC1.08□□□□□ -2.24
CD74P04233 AC090821.2-201ENST00000523552 176 ntBASIC1.08□□□□□ -2.24
CD74P04233 AC005668.1-201ENST00000571142 476 ntBASIC1.08□□□□□ -2.24
CD74P04233 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.08□□□□□ -2.24
CD74P04233 MIR4781-201ENST00000585250 76 ntBASIC1.08□□□□□ -2.24
CD74P04233 AL645939.4-201ENST00000604495 135 ntBASIC1.08□□□□□ -2.24
CD74P04233 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.08□□□□□ -2.24
CD74P04233 AC019193.3-201ENST00000609144 554 ntBASIC1.08□□□□□ -2.24
CD74P04233 AC006504.8-201ENST00000621046 635 ntBASIC1.08□□□□□ -2.24
CD74P04233 AC090617.10-201ENST00000624308 134 ntBASIC1.08□□□□□ -2.24
CD74P04233 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CD74P04233 AC100821.1-201ENST00000523153 2479 ntBASIC1.07□□□□□ -2.24
CD74P04233 Y_RNA.9-201ENST00000362354 101 ntBASIC1.07□□□□□ -2.24
CD74P04233 Y_RNA.164-201ENST00000363709 102 ntBASIC1.07□□□□□ -2.24
CD74P04233 Y_RNA.212-201ENST00000364177 102 ntBASIC1.07□□□□□ -2.24
CD74P04233 Y_RNA.414-201ENST00000384011 101 ntBASIC1.07□□□□□ -2.24
CD74P04233 RNU6-975P-201ENST00000384296 105 ntBASIC1.07□□□□□ -2.24
CD74P04233 MIR548B-201ENST00000385247 97 ntBASIC1.07□□□□□ -2.24
CD74P04233 RNA5SP247-201ENST00000411181 105 ntBASIC1.07□□□□□ -2.24
CD74P04233 RNU6-57P-201ENST00000411348 103 ntBASIC1.07□□□□□ -2.24
CD74P04233 RPL37P10-201ENST00000412884 288 ntBASIC1.07□□□□□ -2.24
CD74P04233 ZNF885P-201ENST00000420174 1098 ntBASIC1.07□□□□□ -2.24
CD74P04233 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.07□□□□□ -2.24
CD74P04233 HMGN2P34-201ENST00000437647 269 ntBASIC1.07□□□□□ -2.24
CD74P04233 RNU1-123P-201ENST00000458950 160 ntBASIC1.07□□□□□ -2.24
CD74P04233 AC007215.1-201ENST00000464893 276 ntBASIC1.07□□□□□ -2.24
CD74P04233 AC114982.1-201ENST00000469402 321 ntBASIC1.07□□□□□ -2.24
CD74P04233 TRBVA-201ENST00000498804 316 ntBASIC1.07□□□□□ -2.24
CD74P04233 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.07□□□□□ -2.24
CD74P04233 ACA59.1-201ENST00000515966 143 ntBASIC1.07□□□□□ -2.24
CD74P04233 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.07□□□□□ -2.24
CD74P04233 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
CD74P04233 MIR3942-201ENST00000585264 109 ntBASIC1.07□□□□□ -2.24
CD74P04233 AC097065.2-201ENST00000608159 533 ntBASIC1.07□□□□□ -2.24
CD74P04233 MIR8063-201ENST00000621930 81 ntBASIC1.07□□□□□ -2.24
CD74P04233 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
CD74P04233 MTND4P5-201ENST00000435821 1374 ntBASIC1.07□□□□□ -2.24
CD74P04233 RNU6-623P-201ENST00000363143 105 ntBASIC1.06□□□□□ -2.24
CD74P04233 SNORA33-201ENST00000363664 130 ntBASIC1.06□□□□□ -2.24
CD74P04233 RNU6-271P-201ENST00000363858 105 ntBASIC1.06□□□□□ -2.24
CD74P04233 RNU6-1019P-201ENST00000364424 107 ntBASIC1.06□□□□□ -2.24
CD74P04233 RNU6-331P-201ENST00000384724 107 ntBASIC1.06□□□□□ -2.24
CD74P04233 MIR181A1-201ENST00000385026 110 ntBASIC1.06□□□□□ -2.24
CD74P04233 RNU6-360P-201ENST00000390944 104 ntBASIC1.06□□□□□ -2.24
CD74P04233 AL117342.1-201ENST00000404861 406 ntBASIC1.06□□□□□ -2.24
CD74P04233 MTCO1P21-201ENST00000416634 589 ntBASIC1.06□□□□□ -2.24
CD74P04233 TOMM22P2-201ENST00000430735 237 ntBASIC1.06□□□□□ -2.24
CD74P04233 MTND3P21-201ENST00000433774 331 ntBASIC1.06□□□□□ -2.24
CD74P04233 JTBP1-201ENST00000441314 247 ntBASIC1.06□□□□□ -2.24
CD74P04233 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.06□□□□□ -2.24
CD74P04233 AC009474.2-201ENST00000451383 136 ntBASIC1.06□□□□□ -2.24
CD74P04233 RNU7-57P-201ENST00000459540 60 ntBASIC1.06□□□□□ -2.24
CD74P04233 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.06□□□□□ -2.24
CD74P04233 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.06□□□□□ -2.24
CD74P04233 AC009033.1-201ENST00000624279 431 ntBASIC1.06□□□□□ -2.24
CD74P04233 AC095038.3-201ENST00000634439 195 ntBASIC1.06□□□□□ -2.24
CD74P04233 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.06□□□□□ -2.24
CD74P04233 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.06□□□□□ -2.24
CD74P04233 Y_RNA.89-201ENST00000363031 102 ntBASIC1.05□□□□□ -2.24
CD74P04233 RNY4P14-201ENST00000363656 96 ntBASIC1.05□□□□□ -2.24
CD74P04233 SNORD116-11-201ENST00000383882 92 ntBASIC1.05□□□□□ -2.24
CD74P04233 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
CD74P04233 Y_RNA.450-201ENST00000384198 113 ntBASIC1.05□□□□□ -2.24
CD74P04233 Y_RNA.516-201ENST00000384541 124 ntBASIC1.05□□□□□ -2.24
CD74P04233 RNU6-1235P-201ENST00000384559 107 ntBASIC1.05□□□□□ -2.24
CD74P04233 RNU6-417P-201ENST00000384712 107 ntBASIC1.05□□□□□ -2.24
CD74P04233 MIR1253-201ENST00000408273 105 ntBASIC1.05□□□□□ -2.24
CD74P04233 RNU6-174P-201ENST00000410406 106 ntBASIC1.05□□□□□ -2.24
CD74P04233 RPL30P16-201ENST00000419341 429 ntBASIC1.05□□□□□ -2.24
CD74P04233 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.05□□□□□ -2.24
CD74P04233 MTCO3P29-201ENST00000432119 779 ntBASIC1.05□□□□□ -2.24
CD74P04233 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.05□□□□□ -2.24
CD74P04233 AC073910.1-201ENST00000445047 438 ntBASIC1.05□□□□□ -2.24
CD74P04233 AC074290.1-201ENST00000448883 135 ntBASIC1.05□□□□□ -2.24
CD74P04233 RNU6-498P-201ENST00000459468 107 ntBASIC1.05□□□□□ -2.24
CD74P04233 AC005840.1-201ENST00000498412 377 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms