Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC010469.2-201ENST00000496412 480 ntBASIC2.32□□□□□ -2.04
LDLRP01130 AC025465.3-201ENST00000510570 311 ntBASIC2.32□□□□□ -2.04
LDLRP01130 RNU6-1023P-201ENST00000516137 106 ntBASIC2.32□□□□□ -2.04
LDLRP01130 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
LDLRP01130 RNU6-570P-201ENST00000517051 105 ntBASIC2.32□□□□□ -2.04
LDLRP01130 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.32□□□□□ -2.04
LDLRP01130 AC034114.1-201ENST00000520293 285 ntBASIC2.32□□□□□ -2.04
LDLRP01130 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.32□□□□□ -2.04
LDLRP01130 AP003733.2-201ENST00000529409 171 ntBASIC2.32□□□□□ -2.04
LDLRP01130 MRPS36P4-201ENST00000534436 298 ntBASIC2.32□□□□□ -2.04
LDLRP01130 AC012433.1-201ENST00000588916 398 ntBASIC2.32□□□□□ -2.04
LDLRP01130 AL365434.2-201ENST00000607979 234 ntBASIC2.32□□□□□ -2.04
LDLRP01130 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
LDLRP01130 AC141273.2-201ENST00000618989 130 ntBASIC2.32□□□□□ -2.04
LDLRP01130 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.32□□□□□ -2.04
LDLRP01130 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
LDLRP01130 RNA5SP456-201ENST00000364002 114 ntBASIC2.31□□□□□ -2.04
LDLRP01130 Y_RNA.458-201ENST00000384240 102 ntBASIC2.31□□□□□ -2.04
LDLRP01130 Y_RNA.471-201ENST00000384312 102 ntBASIC2.31□□□□□ -2.04
LDLRP01130 MIR215-201ENST00000384858 110 ntBASIC2.31□□□□□ -2.04
LDLRP01130 MIR144-201ENST00000384886 86 ntBASIC2.31□□□□□ -2.04
LDLRP01130 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.31□□□□□ -2.04
LDLRP01130 CBX3P9-201ENST00000402326 552 ntBASIC2.31□□□□□ -2.04
LDLRP01130 RN7SKP61-201ENST00000410642 295 ntBASIC2.31□□□□□ -2.04
LDLRP01130 AC078809.1-201ENST00000427601 140 ntBASIC2.31□□□□□ -2.04
LDLRP01130 AL356320.1-201ENST00000429616 163 ntBASIC2.31□□□□□ -2.04
LDLRP01130 HMGN2P3-201ENST00000433603 273 ntBASIC2.31□□□□□ -2.04
LDLRP01130 HMGN2P5-201ENST00000436882 273 ntBASIC2.31□□□□□ -2.04
LDLRP01130 U8.22-201ENST00000459141 133 ntBASIC2.31□□□□□ -2.04
LDLRP01130 AC080013.2-201ENST00000460866 323 ntBASIC2.31□□□□□ -2.04
LDLRP01130 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.31□□□□□ -2.04
LDLRP01130 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.31□□□□□ -2.04
LDLRP01130 HMGB1P35-201ENST00000503360 598 ntBASIC2.31□□□□□ -2.04
LDLRP01130 RNA5SP82-201ENST00000516707 92 ntBASIC2.31□□□□□ -2.04
LDLRP01130 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.31□□□□□ -2.04
LDLRP01130 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.31□□□□□ -2.04
LDLRP01130 AC009127.3-201ENST00000570531 403 ntBASIC2.31□□□□□ -2.04
LDLRP01130 MIR5571-201ENST00000577998 113 ntBASIC2.31□□□□□ -2.04
LDLRP01130 AL390123.1-201ENST00000603216 237 ntBASIC2.31□□□□□ -2.04
LDLRP01130 AL713866.2-201ENST00000603579 219 ntBASIC2.31□□□□□ -2.04
LDLRP01130 AC010900.2-201ENST00000604508 210 ntBASIC2.31□□□□□ -2.04
LDLRP01130 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.31□□□□□ -2.04
LDLRP01130 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
LDLRP01130 AC130454.1-201ENST00000622948 401 ntBASIC2.31□□□□□ -2.04
LDLRP01130 SNORA43.4-201ENST00000629559 138 ntBASIC2.31□□□□□ -2.04
LDLRP01130 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.31□□□□□ -2.04
LDLRP01130 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
LDLRP01130 AC005336.3-201ENST00000623833 2679 ntBASIC2.31□□□□□ -2.04
LDLRP01130 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
LDLRP01130 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LDLRP01130 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.3□□□□□ -2.04
LDLRP01130 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
LDLRP01130 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
LDLRP01130 RNA5SP99-201ENST00000364020 114 ntBASIC2.3□□□□□ -2.04
LDLRP01130 RNA5SP125-201ENST00000364843 120 ntBASIC2.3□□□□□ -2.04
LDLRP01130 Y_RNA.526-201ENST00000384572 110 ntBASIC2.3□□□□□ -2.04
LDLRP01130 Y_RNA.539-201ENST00000384635 107 ntBASIC2.3□□□□□ -2.04
LDLRP01130 MIR27B-201ENST00000385129 97 ntBASIC2.3□□□□□ -2.04
LDLRP01130 RNU6-700P-201ENST00000391043 107 ntBASIC2.3□□□□□ -2.04
LDLRP01130 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.3□□□□□ -2.04
LDLRP01130 MTCO3P19-201ENST00000415864 321 ntBASIC2.3□□□□□ -2.04
LDLRP01130 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.3□□□□□ -2.04
LDLRP01130 AC007098.1-201ENST00000420122 367 ntBASIC2.3□□□□□ -2.04
LDLRP01130 SUMO1P2-201ENST00000452524 304 ntBASIC2.3□□□□□ -2.04
LDLRP01130 RPL39P38-201ENST00000467018 153 ntBASIC2.3□□□□□ -2.04
LDLRP01130 HMGB3P17-201ENST00000504195 649 ntBASIC2.3□□□□□ -2.04
LDLRP01130 SNORA40.15-201ENST00000516884 107 ntBASIC2.3□□□□□ -2.04
LDLRP01130 RNU6-111P-201ENST00000517179 105 ntBASIC2.3□□□□□ -2.04
LDLRP01130 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.3□□□□□ -2.04
LDLRP01130 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.3□□□□□ -2.04
LDLRP01130 AL078605.1-201ENST00000603529 500 ntBASIC2.3□□□□□ -2.04
LDLRP01130 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.3□□□□□ -2.04
LDLRP01130 AL034555.1-201ENST00000604816 211 ntBASIC2.3□□□□□ -2.04
LDLRP01130 AL138963.2-201ENST00000605137 226 ntBASIC2.3□□□□□ -2.04
LDLRP01130 AP001282.2-201ENST00000616149 309 ntBASIC2.3□□□□□ -2.04
LDLRP01130 MIR5739-201ENST00000619803 80 ntBASIC2.3□□□□□ -2.04
LDLRP01130 SDR42E1P4-201ENST00000620894 481 ntBASIC2.3□□□□□ -2.04
LDLRP01130 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
LDLRP01130 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LDLRP01130 AC092268.1-201ENST00000342691 405 ntBASIC2.29□□□□□ -2.04
LDLRP01130 Y_RNA.84-201ENST00000363011 104 ntBASIC2.29□□□□□ -2.04
LDLRP01130 snoU2_19.2-201ENST00000363024 80 ntBASIC2.29□□□□□ -2.04
LDLRP01130 Y_RNA.183-201ENST00000363882 113 ntBASIC2.29□□□□□ -2.04
LDLRP01130 SNORD114-30-201ENST00000364448 72 ntBASIC2.29□□□□□ -2.04
LDLRP01130 Y_RNA.405-201ENST00000383979 100 ntBASIC2.29□□□□□ -2.04
LDLRP01130 RNU6-142P-201ENST00000384019 107 ntBASIC2.29□□□□□ -2.04
LDLRP01130 RNU6-968P-201ENST00000384076 107 ntBASIC2.29□□□□□ -2.04
LDLRP01130 Y_RNA.451-201ENST00000384200 100 ntBASIC2.29□□□□□ -2.04
LDLRP01130 Y_RNA.524-201ENST00000384564 100 ntBASIC2.29□□□□□ -2.04
LDLRP01130 Y_RNA.561-201ENST00000384694 100 ntBASIC2.29□□□□□ -2.04
LDLRP01130 SNORA12.2-201ENST00000391040 156 ntBASIC2.29□□□□□ -2.04
LDLRP01130 MIR190B-201ENST00000401119 79 ntBASIC2.29□□□□□ -2.04
LDLRP01130 AL603908.1-201ENST00000406098 201 ntBASIC2.29□□□□□ -2.04
LDLRP01130 RNU6-1203P-201ENST00000410703 110 ntBASIC2.29□□□□□ -2.04
LDLRP01130 RNU2-14P-201ENST00000411053 191 ntBASIC2.29□□□□□ -2.04
LDLRP01130 TRBVB-201ENST00000477100 408 ntBASIC2.29□□□□□ -2.04
LDLRP01130 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.29□□□□□ -2.04
LDLRP01130 AL590705.4-201ENST00000532209 134 ntBASIC2.29□□□□□ -2.04
LDLRP01130 MIR3136-201ENST00000583498 78 ntBASIC2.29□□□□□ -2.04
LDLRP01130 RPS29P30-201ENST00000600975 111 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms